Parental gene: | LPCAT2, ENSPTRG00000008124 |
| Aliases: | LPCAT2, AYTL1 |
| Description: | lysophosphatidylcholine acyltransferase 2 [Source:HGNC Symbol;Acc:26032] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 16:54561085..54638782(+) |
>ENSPTRG00000008124
ATGAGCTGGTCCGCCCAGGCGGCGGCAGTGGCGGCCACACTGCCAGGTGCCGGCGTTGGGAACGTGGGGCTGCGGCCGCC
CATGGTGCCCCGTCAGGCGTCCTTCTTCCCGCCGCCGGTGCCGAACCCCTTCGTGCAGCAGACGCAGATCGGCTCCGCGA
GGCGGGTCCAGATTTTCCTTCTTGGGATTATCTTGCTTCCAATTCGTGTCTTATTGGTTGCATTAATTTTATTACTTGCA
TGGCCATTTGCTGCAATTTCAACAGTATGCTGTCCTGAAAAGCTGACCCACCCAATAACTGGTTGGAGGAGGAAAATTAC
TCAAACAGCTTTGAAATTTCTGGGTCGTGCTATGTTCTTTTCAATGGGATTTATAGTTGCTGTAAAAGGAAAGATTGCAA
GTCCTTTGGAAGCACCAGTTTTTGTTGCTGCCCCTCATTCAACATTCTTTGATGGAATTGCCTGTATTGTAGCTGGGTTA
CCTTCTATGGTATCTCGAAATGAGAATGCACAAGTCCCTCTGATTGGCAGACTGTTACGGGCTGTGCAACCAGTTTTGGT
GTCCCGTGTAGATCCAGATTCCCGAAAAAACACAATAAATGAAATAATAAAGCGAACAACATCAGGAGGAGAATGGCCCC
AGATACTAGTTTTCCCAGAAGGTACTTGTACTAATCGTTCCTGTTTGATTACTTTTAAACCAGGAGCCTTCATTCCAGGA
GTTCCAGTGCAGCCAGTCCTCCTCAGATACCCAAACAAGCTGGATACTGTGACCTGGACATGGCAAGGATATACATTCAT
TCAGCTTTGTATGCTTACTTTCTGCCAGCTCTTCACAAAGGTAGAAGTTGAGTTTATGCCAGTTCAAGTACCAAATGATG
AAGAAAAAAATGATCCTGTCCTTTTTGCCAATAAAGTCCGGAATTTAATGGCAGAAGCTCTGGGAATACCAGTAACAGAT
CATACCTATGAAGATTGCAGATTGATGATTTCAGCAGGACAGCTAACATTGCCTATGGAAGCTGGGCTGGTGGAATTTAC
TAAAATTAGCCGGAAATTGAAATTAGATTGGGATGGTGTTCGTAAGCATTTGGATGAATATGCATCTATTGCGAGTTCCT
CAAAAGGAGGAAGAATTGGAATTGAAGAATTCGCCAAGTATTTAAAGTTGCCTGTTTCAGATGTCTTGAGACAACTTTTT
GCACTCTTTGACAGGAACCATGATGGCAGCATTGACTTCCGAGAGTATGTGATTGGCCTGGCTGTCTTGTGCAACCCTTC
CAACACAGAGGAGATCATCCAGGTGGCATTTAAGCTGTTTGATGTTGATGAGGATGGCTACATAACGGAGGAAGAGTTCT
CCACCATTCTACAGGCTTCCCTTGGAGTGCCTGACCTTGATGTTTCTGGTCTCTTCAAGGAAATAGCCCAAGGGGACTCA
ATTTCCTATGAGGAATTTAAAAGTTTTGCCTTAAAGCATCCAGAATATGCTAAGATATTTACAACATACCTAGACCTCCA
GACGTGCCATGTGTTTTCATTACCAGAAGAAGTCCAGACAACCCCCTCCACCGCCAGTAATAAAGTCAGCCCTGAAAAGC
ATGAAGAGAGTACCTCAGACAAAAAAGATGACTGA
ATGAGCTGGTCCGCCCAGGCGGCGGCAGTGGCGGCCACACTGCCAGGTGCCGGCGTTGGGAACGTGGGGCTGCGGCCGCC
CATGGTGCCCCGTCAGGCGTCCTTCTTCCCGCCGCCGGTGCCGAACCCCTTCGTGCAGCAGACGCAGATCGGCTCCGCGA
GGCGGGTCCAGATTTTCCTTCTTGGGATTATCTTGCTTCCAATTCGTGTCTTATTGGTTGCATTAATTTTATTACTTGCA
TGGCCATTTGCTGCAATTTCAACAGTATGCTGTCCTGAAAAGCTGACCCACCCAATAACTGGTTGGAGGAGGAAAATTAC
TCAAACAGCTTTGAAATTTCTGGGTCGTGCTATGTTCTTTTCAATGGGATTTATAGTTGCTGTAAAAGGAAAGATTGCAA
GTCCTTTGGAAGCACCAGTTTTTGTTGCTGCCCCTCATTCAACATTCTTTGATGGAATTGCCTGTATTGTAGCTGGGTTA
CCTTCTATGGTATCTCGAAATGAGAATGCACAAGTCCCTCTGATTGGCAGACTGTTACGGGCTGTGCAACCAGTTTTGGT
GTCCCGTGTAGATCCAGATTCCCGAAAAAACACAATAAATGAAATAATAAAGCGAACAACATCAGGAGGAGAATGGCCCC
AGATACTAGTTTTCCCAGAAGGTACTTGTACTAATCGTTCCTGTTTGATTACTTTTAAACCAGGAGCCTTCATTCCAGGA
GTTCCAGTGCAGCCAGTCCTCCTCAGATACCCAAACAAGCTGGATACTGTGACCTGGACATGGCAAGGATATACATTCAT
TCAGCTTTGTATGCTTACTTTCTGCCAGCTCTTCACAAAGGTAGAAGTTGAGTTTATGCCAGTTCAAGTACCAAATGATG
AAGAAAAAAATGATCCTGTCCTTTTTGCCAATAAAGTCCGGAATTTAATGGCAGAAGCTCTGGGAATACCAGTAACAGAT
CATACCTATGAAGATTGCAGATTGATGATTTCAGCAGGACAGCTAACATTGCCTATGGAAGCTGGGCTGGTGGAATTTAC
TAAAATTAGCCGGAAATTGAAATTAGATTGGGATGGTGTTCGTAAGCATTTGGATGAATATGCATCTATTGCGAGTTCCT
CAAAAGGAGGAAGAATTGGAATTGAAGAATTCGCCAAGTATTTAAAGTTGCCTGTTTCAGATGTCTTGAGACAACTTTTT
GCACTCTTTGACAGGAACCATGATGGCAGCATTGACTTCCGAGAGTATGTGATTGGCCTGGCTGTCTTGTGCAACCCTTC
CAACACAGAGGAGATCATCCAGGTGGCATTTAAGCTGTTTGATGTTGATGAGGATGGCTACATAACGGAGGAAGAGTTCT
CCACCATTCTACAGGCTTCCCTTGGAGTGCCTGACCTTGATGTTTCTGGTCTCTTCAAGGAAATAGCCCAAGGGGACTCA
ATTTCCTATGAGGAATTTAAAAGTTTTGCCTTAAAGCATCCAGAATATGCTAAGATATTTACAACATACCTAGACCTCCA
GACGTGCCATGTGTTTTCATTACCAGAAGAAGTCCAGACAACCCCCTCCACCGCCAGTAATAAAGTCAGCCCTGAAAAGC
ATGAAGAGAGTACCTCAGACAAAAAAGATGACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 2 .93 RPM |
| SRP007412_cerebellum | 6 .38 RPM |
| SRP007412_heart | 1 .84 RPM |
| SRP007412_kidney | 7 .90 RPM |
| SRP007412_liver | 4 .06 RPM |
| SRP007412_testis | 3 .16 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000019272 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000012902 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000006859 | ortholog_one2one | 1 retrogene | |
| Dipodomys ordii | ENSDORG00000013193 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000009649 | ortholog_one2one | 1 retrogene | |
| Erinaceus europaeus | ENSEEUG00000014277 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000087253 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000005144 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000003965 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000004008 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000004478 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000033192 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000001258 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000007358 | ortholog_one2one | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000007801 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000016643 | ortholog_one2one | 1 retrogene | |
| Sorex araneus | ENSSARG00000011914 | ortholog_one2one | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000012383 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000001182 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_171 | 60.57 | 82.72 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_2928 | 66.47 | 61.95 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000008124 retrocopies