Parental gene:

MMADHC, ENSPTRG00000012525

Aliases:None
Description:methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria [Source:HGNC Symbol;Acc:25221]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:2B:153769984..153788164(-)


>ENSPTRG00000012525
ATGGCCAATGTGCTTTGTAACAGAGCCAGACTGGTTTCCTATCTCCCAGGATTTTGCTCTTTAGTTAAAAGGGTTGTCAA
TCCCAAAGCCTTTTCGACTGCAGGATCATCAGGTTCGGATGAGTCTCATGTGGCTGCTGCACCTCCAGATATATGCTCTC
GAACAGTGTGGCCTGATGAAACTATGGGACCCTTTGGACCTCAAGATCAGAGGTTCCAGCTTCCTGGCAACATAGGTTTT
GATTGTCACCTCAATGGGACTGCTTCACAGAAGAAAAGCCTGGTTCATAAAACTTTGCCTGATGTTCTAGCAGAACCCTT
ATCAAGTGAAAGACATGAGTTTGTGATGGCACAATATGTGAATGAATTTCAGGGTAATGATGCACCTGTTGAACAAGAAA
TTAACAGTGCAGAAACTTACTTTGAAAGTGCCAGAGTAGAGTGTGCAATACAAACATGTCCAGAATTGCTGCGAAAAGAT
TTTGAATCACTGTTTCCAGAAGTAGCTAATGGCAAACTAATGATTCTGACTGTAACACAAAAAACTAAGAATGATATGAC
TGTTTGGAGTGAAGAAGTAGAAATTGAAAGAGAAGTGCTCTTAGAAAAGACGGAGTCTCTCTCGCCCAGGCCGGAGTGCT
GTGGCATGATCTCGGCTCACTGCAATCTCTGCCTCCCGGGTTCAAGCAGTTCTTCTGCTTCAGCCTCCCAATTCATCAAT
GGTGCTAAGGAAATTTGCTATGCTCTTCGAGCTGAGGGTTATTGGGCTGACTTTATTGACCCATCATCTGGTTTGGCATT
TTTTGGACCATATACAAACAACACTCTTTTTGAAACTGATGAACGCTACCGACATTTAGGATTCTCTGTTGATGACCTTG
GATGCTGTAAAGTGATTCGTCATAGTCTCTGGGGTACCCATGTAGTTGTAGGGAGTATCTTCACTAATGCAACACCAGAC
AGCCATATTATGAAGAAATTAAGTGGAAATTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 20 .29 RPM
SRP007412_cerebellum 18 .46 RPM
SRP007412_heart 35 .91 RPM
SRP007412_kidney 37 .21 RPM
SRP007412_liver 31 .36 RPM
SRP007412_testis 79 .46 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000003086 ortholog_one2one 2 retrogenes
retro_cjac_4082, retro_cjac_4101,
Cavia porcellus ENSCPOG00000007690 ortholog_one2many 1 retrogene
retro_cpor_30,
Homo sapiens ENSG00000168288 ortholog_one2one 2 retrogenes
retro_hsap_4716, retro_hsap_865,
Gorilla gorilla ENSGGOG00000027348 ortholog_one2one 1 retrogene
retro_ggor_704,
Macaca mulatta ENSMMUG00000005633 ortholog_one2one 1 retrogene
retro_mmul_1058,
Monodelphis domestica ENSMODG00000003566 ortholog_one2one 2 retrogenes
retro_mdom_1749, retro_mdom_620,
Mustela putorius furo ENSMPUG00000000323 ortholog_one2one 1 retrogene
retro_mputfur_1253,
Nomascus leucogenys ENSNLEG00000010795 ortholog_one2one 2 retrogenes
retro_nleu_1988, retro_nleu_426,
Otolemur garnettii ENSOGAG00000034385 ortholog_one2one 4 retrogenes
retro_ogar_3266, retro_ogar_356, retro_ogar_688, retro_ogar_813,
Ictidomys tridecemlineatus ENSSTOG00000021576 ortholog_one2one 1 retrogene
retro_itri_1809,
Tarsius syrichta ENSTSYG00000009075 ortholog_one2one 1 retrogene
retro_tsyr_1690,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_599 83.33 52.42
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Download FASTA sequences of all ENSPTRG00000012525 retrocopies