Parental gene:

DNAJB14, ENSPTRG00000016311

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:4:102380273..102427472(-)


>ENSPTRG00000016311
ATGGAGGGGAACAGGGATGAGGCTGAGAAATGTGTCGAGATCGCCCGGGAGGCCCTGAACGCCGGCAACCGCGAGAAGGC
CCAGCGCTTCCTGCAGAAGGCCGAGAAGCTCTACCCACTGCCCTCGGCCCGCGCACTATTGGAAATAATTATGAAAAATG
GAAGCACGGCTGGAAATAGCCCTCATTGCCGAAAACCATCAGGTAGTGGCGATCAAAGCAAGCCTAATTGCACAAAGGAC
AGCACATCTGGTAGTGGTGAAGGTGGAAAAGGCTATACCAAAGACCAAGTAGATGGAGTTCTCAGCATAAACAAATGTAA
AAATTACTATGAAGTACTTGGAGTTACGAAAGATGCTGGTGATGAAGATTTGAAAAAAGCTTATAGAAAGCTTGCTTTGA
AGTTTCATCCAGACAAAAACCATGCACCTGGAGCAACAGATGCTTTTAAAAAGATTGGAAATGCTTATGCTGTTTTAAGT
AATCCAGAAAAGCGAAAACAGTATGACCTCACGGGCAATGAAGAACAAGCATGTAACCACCAAAACAATGGCAGATTTAA
TTTCCATAGAGGTTGTGAAGCTGATATAACTCCAGAAGACTTGTTTAATATATTTTTTGGGGGTGGATTTCCTTCAGGTA
GTGTACATTCTTTTTCAAATGGAAGAGCTGGTTATAGCCAACAACATCAGCATCGACATAGTGGACATGAAAGAGAAGAG
GAAAGAGGAGATGGAGGTTTTTCTGTGTTTATCCAGCTGATGCCCATAATTGTATTGATCCTCGTGTCATTATTAAGCCA
GTTGATGGTCTCTAATCCTCCTTATTCCTTATATCCCAGATCTGGAACTGGGCAAACTATTAAAATGCAAACAGAAAACT
TGGGTGTTGTTTATTACGTCAACAAGGACTTCAAAAATGAATATAAAGGAATGTTATTACAAAAGGTAGAAAAGAGTGTG
GAGGAAGATTATGTGACTAATATTCGAAATAACTGCTGGAAAGAAAGACAACAAAAAACAGATATGCAGTATGCAGCAAA
AGTATACCGTGATGATCGACTCCGAAGGAAGGCAGATGCCTTGAGCATGGACAACTGTAAAGAATTAGAGCGGCTTACCA
GTCTTTATAAAGGAGGATGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 13 .07 RPM
SRP007412_cerebellum 18 .89 RPM
SRP007412_heart 6 .30 RPM
SRP007412_kidney 10 .49 RPM
SRP007412_liver 4 .45 RPM
SRP007412_testis 3 .16 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000012468 ortholog_one2many 1 retrogene
retro_acar_144,
Homo sapiens ENSG00000164031 ortholog_one2one 1 retrogene
retro_hsap_1583,
Monodelphis domestica ENSMODG00000020687 ortholog_one2many 2 retrogenes
retro_mdom_1398, retro_mdom_752,
Nomascus leucogenys ENSNLEG00000013668 ortholog_one2one 2 retrogenes
retro_nleu_1761, retro_nleu_2409,
Otolemur garnettii ENSOGAG00000005340 ortholog_one2many 1 retrogene
retro_ogar_120,
Pongo abelii ENSPPYG00000014956 ortholog_one2one 3 retrogenes
retro_pabe_1304, retro_pabe_982, retro_pabe_983,
Pan troglodytes ENSPTRG00000002613 within_species_paralog 1 retrogene
retro_ptro_1608,
Ictidomys tridecemlineatus ENSSTOG00000021338 ortholog_one2many 1 retrogene
retro_itri_1840,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_1066 93.19 50.13
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Download FASTA sequences of all ENSPTRG00000016311 retrocopies