Parental gene:

MTHFD2, ENSPVAG00000013948

Aliases:None
Description:methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase [Source:HGNC Symbol;Acc:7434]
Organism:Megabat (Pteropus vampyrus)
Coordinates:GeneScaffold_4051:12857..25722(+)


>ENSPVAG00000013948
ATGGCTGCTGCTTCCCTCGTGTCCACGTTGGCCGCCCGGCTGCTCCGGCCTGCACAGAACTCCCGCCTCTACCACCGTCC
TTTCCACCTCTCGGCAGTTCGAAATGAAGCTGTTGTTATTTCTGGAAGGAAGCTTGCCCAGCAGATCAAGCAGGAAGTGC
GGCAGGAGGTGGAAGAGTGGGTGGCATCGGGCAACAAACGGCCGCACCTGAGTGTGGTTCTGGTTGGCGAGAATCCTGCA
AGTCATTCCTACGTCCTCAACAAAACCAGGGCCGCTGCAGATGTGGGAATCAACAGTGAGACAATTGTGAAACCAGCTTC
AATTTCAGAGGAAGAACTGTTGAATTTAATTAGTAAACTCAATAATGATGACAATGTCGATGGCCTCCTTGTTCAGCTGC
CTCTCCCAGAGCACATTGATGAGAGAAAGATCTGCAATGCTGTTTCTCCAGACAAGGATGTCGATGGCTTTCATGTAATT
AATGTACGAATGTGTGTAGTTCATCATTCCATGTTACCAGCTACCCCATGGGGTGTATGGGAGATAATTAAGCGAACTGG
CATTCCAACCCTTGGAAAAAACGTGGTTGTAGCTGGAAGGTCAAAAAATGTTGGAATGCCTATTGCGATGTTACTGCACA
CAGATGGGGCCCACGAACGTCCTGGAGGTGATGCTACTGTTACAATATCTCACCGATACACTCCCAAAGAGCAGCTGAAG
AAACATACAATTCTTGCAGATATTGTGGTCTCTGCTGCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNGAGTCAAGAAGAAAGCTGGTTACATCACTCCAGTCCCTGGGGGTGTTGGTCCCATGACAGTGGCGATGCTAATG
AAGAATACCATTCTTGCTGCAAAAAAGGTGCTGAGGCTTGAAGAGCAGGAAGTACTGAAGTCTAAGGAGCTTGGAGTGGC
AACTAATTAA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000017345 ortholog_one2many 2 retrogenes
retro_amel_1098, retro_amel_1584,
Canis familiaris ENSCAFG00000008716 ortholog_one2many 1 retrogene
retro_cfam_580,
Callithrix jacchus ENSCJAG00000017810 ortholog_one2many 3 retrogenes
retro_cjac_2225, retro_cjac_2568, retro_cjac_3078,
Homo sapiens ENSG00000065911 ortholog_one2one 5 retrogenes
retro_hsap_2732, retro_hsap_2817, retro_hsap_3002, retro_hsap_3309, retro_hsap_3874,
Macropus eugenii ENSMEUG00000013987 ortholog_one2one 4 retrogenes
retro_meug_1468, retro_meug_152, retro_meug_1577, retro_meug_2074,
Mustela putorius furo ENSMPUG00000007829 ortholog_one2one 3 retrogenes
retro_mputfur_1087, retro_mputfur_1397, retro_mputfur_1551,
Nomascus leucogenys ENSNLEG00000000326 ortholog_one2one 5 retrogenes
retro_nleu_1196, retro_nleu_207, retro_nleu_2501, retro_nleu_595, retro_nleu_749,
Otolemur garnettii ENSOGAG00000009089 ortholog_one2one 1 retrogene
retro_ogar_3390,
Pongo abelii ENSPPYG00000012283 ortholog_one2many 3 retrogenes
retro_pabe_2271, retro_pabe_2729, retro_pabe_3077,
Pan troglodytes ENSPTRG00000012081 ortholog_one2one 4 retrogenes
retro_ptro_1846, retro_ptro_1910, retro_ptro_2162, retro_ptro_2641,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pvam_1357 77.72 54.15
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2. retro_pvam_1414 78.49 51.86
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Download FASTA sequences of all ENSPVAG00000013948 retrocopies