Parental gene: | Rnf149, ENSRNOG00000013946 |
| Aliases: | None |
| Description: | Protein Rnf149 [Source:UniProtKB/TrEMBL;Acc:D3ZI66] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 9:45974157..45998057(-) |
>ENSRNOG00000013946
ATGGCGGCGCGGCGGCGGCCCGCGGCTGGCGTGGGAGCCCGGGACGCGCTCGCGGTGCTTGCGCTGGCCTTGTGTGCTCC
CGGGGTGGGCGGCGGGGCACTCGAGTGGTACTCCGCCACGGTGAGCATCGAGTACGTGGACCCGCAGTCGAACCTGACGG
TGTGGAGCGTGACCGAGAGCGGCCGCTTCGGCGACAGCTCGCTCAGGGAGGAGAGGCAGGGCCTGGTGGGCGTCCCGCGC
GCTCCCGCGGATGCGGAGGGCTGCGCGCCCGACACGCGCTTCGTGGCGCCCGGCGCCCTCGGCAACGCGCCCTGGGTGGC
GCTGGTGGCGCGAGGCGGCTGCACCTTCAAGGACAAGGTGCTGGCGGCGGCGCGGAGGAACGCCTCGGCCGTGGTGGTCT
ACAACCAGGAGCGCTACGGGAACGCCACCGAGCCCATGTCCCACGCGGGAACAGGCAGCATAGTCGTCATCATGATTAGC
TACCCAAAAGGACGGGAGATTTCTGATCTGGTGCAAAAAGGAATTCCAGTAAAAATGAGGATAGAGATTGGTACTCGTCA
TATGCAGGAGTTCATCAGCGGTCAGTCTGTGGTGTTTGTGGCCATTGCCTTCATCACGATGATGATTATCTCATTAGCAT
GGCTAATATTCTATTATATACAGCGTTTCCTATATACTGGCTCACAGTTTGGAAGTCAGAATCATAGAAAGGAAACTAAG
AAGGTTATTGGCCAGCTTCCACTACACACTGTGAAGCATGGAGAGAAGGGAATCGATGTTGATGCTGAGAATTGTGCAGT
GTGTATTGAAAACTTTAAAGTCAAAGATGTTATCAGAATCCTGCCATGCAAGCATATTTTTCATAGAATATGCATTGACC
CATGGCTTTTGGATCACCGAACGTGTCCAATGTGTAAACTTGATGTCATCAAAGCCCTGGGATATTGGGGGGACCCTGAA
GATGCACAGGACCTACCCATCCCAGAAGCTGCCCCAGGAAGTGTTTCTGTTGGGAATCTGAGTGTGACAGTCCAAGATGA
GGAGAGGAGTGAAAGCAACCTTCCATCATCTTCCTCAAGCGAGTTTGGGCCACACCGCCCTTGTCTTAAAGAAGATGCAG
AGGAGGACACAGCATTGCTAGGAGCCGGCAGGAGTGACCCTCAGCATGGAGGATCCATCTGCTAG
ATGGCGGCGCGGCGGCGGCCCGCGGCTGGCGTGGGAGCCCGGGACGCGCTCGCGGTGCTTGCGCTGGCCTTGTGTGCTCC
CGGGGTGGGCGGCGGGGCACTCGAGTGGTACTCCGCCACGGTGAGCATCGAGTACGTGGACCCGCAGTCGAACCTGACGG
TGTGGAGCGTGACCGAGAGCGGCCGCTTCGGCGACAGCTCGCTCAGGGAGGAGAGGCAGGGCCTGGTGGGCGTCCCGCGC
GCTCCCGCGGATGCGGAGGGCTGCGCGCCCGACACGCGCTTCGTGGCGCCCGGCGCCCTCGGCAACGCGCCCTGGGTGGC
GCTGGTGGCGCGAGGCGGCTGCACCTTCAAGGACAAGGTGCTGGCGGCGGCGCGGAGGAACGCCTCGGCCGTGGTGGTCT
ACAACCAGGAGCGCTACGGGAACGCCACCGAGCCCATGTCCCACGCGGGAACAGGCAGCATAGTCGTCATCATGATTAGC
TACCCAAAAGGACGGGAGATTTCTGATCTGGTGCAAAAAGGAATTCCAGTAAAAATGAGGATAGAGATTGGTACTCGTCA
TATGCAGGAGTTCATCAGCGGTCAGTCTGTGGTGTTTGTGGCCATTGCCTTCATCACGATGATGATTATCTCATTAGCAT
GGCTAATATTCTATTATATACAGCGTTTCCTATATACTGGCTCACAGTTTGGAAGTCAGAATCATAGAAAGGAAACTAAG
AAGGTTATTGGCCAGCTTCCACTACACACTGTGAAGCATGGAGAGAAGGGAATCGATGTTGATGCTGAGAATTGTGCAGT
GTGTATTGAAAACTTTAAAGTCAAAGATGTTATCAGAATCCTGCCATGCAAGCATATTTTTCATAGAATATGCATTGACC
CATGGCTTTTGGATCACCGAACGTGTCCAATGTGTAAACTTGATGTCATCAAAGCCCTGGGATATTGGGGGGACCCTGAA
GATGCACAGGACCTACCCATCCCAGAAGCTGCCCCAGGAAGTGTTTCTGTTGGGAATCTGAGTGTGACAGTCCAAGATGA
GGAGAGGAGTGAAAGCAACCTTCCATCATCTTCCTCAAGCGAGTTTGGGCCACACCGCCCTTGTCTTAAAGAAGATGCAG
AGGAGGACACAGCATTGCTAGGAGCCGGCAGGAGTGACCCTCAGCATGGAGGATCCATCTGCTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 64 .88 RPM |
| SRP017611_kidney | 54 .50 RPM |
| SRP017611_brain | 29 .48 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000012057 | ortholog_one2one | 2 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000011956 | ortholog_one2one | 3 retrogenes | |
| Macropus eugenii | ENSMEUG00000014821 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000007110 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000016450 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_1406 | 88.28 | 64.97 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_rnor_2527 | 79.41 | 50.76 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000013946 retrocopies