Parental gene:

Arpc5l, ENSRNOG00000014317

Aliases:None
Description:actin-related protein 2/3 complex subunit 5-like protein [Source:RefSeq peptide;Acc:NP_001032856]
Organism:Rat (Rattus norvegicus)
Coordinates:3:28523339..28530898(+)


>ENSRNOG00000014317
ATGGCCCGGAACACACTGTCCTCACGCTTCCGCCGAGTGGATATCGACGAATTTGACGAGAACAAATTCGTAGACGAGCA
CGAAGAGGCGGCGGCGGCGTCGGGCGAGCCAGGCCCCGACCCCTGCGAGGTAGACGGGCTCCTGCGGCAATGGGACATGC
TTCGGGCATTCCATGCAGCCTTGCGGAACTCTCCAATCAACACCAAGAATCAAGCTGTGAAGGAACGAGCCCAGGGTATA
GTCCTGAAAGTACTCACAAACTTCAAGAGCAGCGAGATTGAGCAGGCTGTGCAGTCACTGGACAGGAATGGCATTGACTT
GCTAATGAAGTACATTTATAAAGGGTTTGAGAAGCCCACAGAAAATAGCAGTGCAGTGTTACTCCAGTGGCATGAAAAGG
CTTTAGCTGTTGGAGGACTAGGCTCCATTATAAGAGTTCTTACAGCAAGAAAGACTGTTTAA

Library Parental gene expression (RPM)
SRP017611_brain 16 .61 RPM
SRP017611_kidney 17 .93 RPM
SRP017611_liver 7 .93 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000016540 ortholog_one2one 1 retrogene
retro_amel_1798,
Callithrix jacchus ENSCJAG00000006730 ortholog_one2one 4 retrogenes
retro_cjac_1282, retro_cjac_1725, retro_cjac_2744, retro_cjac_3941,
Felis catus ENSFCAG00000028753 ortholog_one2one 1 retrogene
retro_fcat_1316,
Macaca mulatta ENSMMUG00000020628 ortholog_one2one 2 retrogenes
retro_mmul_1650, retro_mmul_623,
Mustela putorius furo ENSMPUG00000013924 ortholog_one2one 1 retrogene
retro_mputfur_1532,
Oryctolagus cuniculus ENSOCUG00000002997 ortholog_one2one 1 retrogene
retro_ocun_518,
Procavia capensis ENSPCAG00000013936 ortholog_one2one 1 retrogene
retro_pcap_274,
Pan troglodytes ENSPTRG00000021362 ortholog_one2one 1 retrogene
retro_ptro_2185,
Rattus norvegicus ENSRNOG00000028062 within_species_paralog 1 retrogene
retro_rnor_1873,
Ictidomys tridecemlineatus ENSSTOG00000007907 ortholog_one2one 2 retrogenes
retro_itri_275, retro_itri_767,
Tupaia belangeri ENSTBEG00000008398 ortholog_one2one 1 retrogene
retro_tbel_442,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_2730 99.35 100.00
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Download FASTA sequences of all ENSRNOG00000014317 retrocopies