Parental gene:

Gstp1, ENSRNOG00000018237

Aliases:Gstp1, GST-P, Gst3, Gstp, Gstp2
Description:Glutathione S-transferase P [Source:UniProtKB/Swiss-Prot;Acc:P04906]
Organism:Rat (Rattus norvegicus)
Coordinates:1:226162329..226164798(-)


>ENSRNOG00000018237
ATGCCACCGTACACCATTGTGTACTTCCCAGTTCGAGGGCGCTGTGAGGCCACGCGCATGCTGCTGGCTGACCAGGGCCA
GAGCTGGAAGGAGGAGGTGGTTACCATAGATGTCTGGCTTCAAGGCTCGCTCAAGTCCACTTGTCTGTATGGGCAGCTCC
CCAAGTTTGAAGATGGAGACCTCACCCTTTACCAATCTAATGCCATCTTGAGGCACCTGGGTCGCTCTTTAGGGCTTTAT
GGGAAAGACCAGAAGGAGGCTGCCTTGGTGGATATGGTGAATGATGGGGTGGAGGACCTTCGATGCAAATATGGTACCCT
CATCTACACTAACTATGAGAATGGTAAGGATGACTATGTGAAGGCCCTGCCTGGGCATCTGAAACCTTTTGAGACCCTGC
TGTCCCAGAACCAGGGAGGCAAAGCTTTCATTGTGGGTAACCAGATTTCCTTTGCAGATTACAACTTGCTGGACCTGCTG
CTGGTCCACCAAGTCCTGGCCCCTGGCTGCCTGGACAACTTCCCCCTGCTCTCTGCCTATGTGGCTCGCCTCAGTGCCCG
CCCCAAGATCAAGGCCTTTCTGTCCTCCCCTGACCATTTGAACCGTCCCATCAACGGCAATGGTAAACAGTAG

Library Parental gene expression (RPM)
SRP017611_brain 48 .75 RPM
SRP017611_kidney 229 .93 RPM
SRP017611_liver 12 .78 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000001020 possible_ortholog 3 retrogenes
retro_amel_1921, retro_amel_249, retro_amel_778,
Canis familiaris ENSCAFG00000011349 possible_ortholog 4 retrogenes
retro_cfam_143, retro_cfam_2043, retro_cfam_46, retro_cfam_617,
Callithrix jacchus ENSCJAG00000000879 possible_ortholog 1 retrogene
retro_cjac_3321,
Macropus eugenii ENSMEUG00000001519 ortholog_many2many 2 retrogenes
retro_meug_1519, retro_meug_1762,
Myotis lucifugus ENSMLUG00000011529 possible_ortholog 4 retrogenes
retro_mluc_1669, retro_mluc_1714, retro_mluc_1962, retro_mluc_629,
Mustela putorius furo ENSMPUG00000004029 possible_ortholog 2 retrogenes
retro_mputfur_1215, retro_mputfur_1463,
Mus musculus ENSMUSG00000038155 ortholog_many2many 1 retrogene
retro_mmus_521,
Oryctolagus cuniculus ENSOCUG00000002230 possible_ortholog 1 retrogene
retro_ocun_391,
Pteropus vampyrus ENSPVAG00000008586 possible_ortholog 6 retrogenes
retro_pvam_1119, retro_pvam_1463, retro_pvam_568, retro_pvam_664, retro_pvam_681, retro_pvam_718,
Rattus norvegicus ENSRNOG00000047034 within_species_paralog 1 retrogene
retro_rnor_963,
Tursiops truncatus ENSTTRG00000003746 possible_ortholog 1 retrogene
retro_ttru_1416,
Vicugna pacos ENSVPAG00000008003 possible_ortholog 1 retrogene
retro_vpac_73,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_769 88.26 100.00
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2. retro_rnor_2140 87.18 55.71
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3. retro_rnor_2567 73.58 91.90
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4. retro_rnor_2842 90.14 99.52
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Download FASTA sequences of all ENSRNOG00000018237 retrocopies