Parental gene:

Smim7, ENSRNOG00000042037

Aliases:None
Description:UPF0608 protein C19orf42 homolog [Source:UniProtKB/Swiss-Prot;Acc:B0BN70]
Organism:Rat (Rattus norvegicus)
Coordinates:16:18838289..18842195(+)


>ENSRNOG00000042037
ATGATCGGAGACATACTGCTGTTCGGGACGCTACTGATGAACGCCGGGGCTGTGCTCAACTTTAAACTGAAAAAGAAGGA
CACGCAAGGCTTTGGGGAGGAATCGAGGGAACCTAGCACAGGCGACAACATCCGAGAGTTTTTACTGAGCCTGAGGTATT
TCCGGATCTTCATTGCGCTGTGGAATGTGTTCATGATGCTCTGCATGATCGTACTGTTCGGCTCTTGA

Library Parental gene expression (RPM)
SRP017611_liver 20 .04 RPM
SRP017611_kidney 39 .08 RPM
SRP017611_brain 41 .12 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000010105 ortholog_one2one 1 retrogene
retro_amel_1688,
Canis familiaris ENSCAFG00000015643 ortholog_one2one 1 retrogene
retro_cfam_1927,
Callithrix jacchus ENSCJAG00000013936 ortholog_one2one 1 retrogene
retro_cjac_1223,
Equus caballus ENSECAG00000026861 ortholog_one2one 1 retrogene
retro_ecab_640,
Felis catus ENSFCAG00000016411 ortholog_one2one 1 retrogene
retro_fcat_934,
Homo sapiens ENSG00000214046 ortholog_one2many 1 retrogene
retro_hsap_2244,
Mus musculus ENSMUSG00000044600 ortholog_one2one 1 retrogene
retro_mmus_450,
Nomascus leucogenys ENSNLEG00000005569 ortholog_one2one 1 retrogene
retro_nleu_1315,
Pongo abelii ENSPPYG00000009694 ortholog_one2one 2 retrogenes
retro_pabe_1964, retro_pabe_2031,
Pan troglodytes ENSPTRG00000010650 ortholog_one2one 1 retrogene
retro_ptro_1589,
Sus scrofa ENSSSCG00000013863 ortholog_one2one 1 retrogene
retro_sscr_955,
Tarsius syrichta ENSTSYG00000009556 ortholog_one2one 1 retrogene
retro_tsyr_1550,
Tursiops truncatus ENSTTRG00000015020 ortholog_one2one 2 retrogenes
retro_ttru_136, retro_ttru_597,
Vicugna pacos ENSVPAG00000006699 ortholog_one2one 1 retrogene
retro_vpac_65,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_2694 77.33 100.00
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Download FASTA sequences of all ENSRNOG00000042037 retrocopies