Parental gene:

Lrrc57, ENSRNOG00000048310

Aliases:None
Description:None
Organism:Rat (Rattus norvegicus)
Coordinates:3:118930876..118932607(-)


>ENSRNOG00000048310
ATGGGAAACAGTGCCCTCCGTGCTCATGTGGAAACAGCGCAGAAAACTGGTGTCTTTCAGCTTAAAGACCGTGGTCTGAC
CGAGTTCCCCTCAGAGTTGCAGAAGCTGACAAGCAATCTTAGGACCATCGATTTGTCCAACAACAAGATCGACAGCCTAC
CACCTCTGATAATAGGAAAGTTCACTCTGCTAAAGAGTCTCTCTCTCAACAACAACAAACTGACTGTTCTACCTGATGAA
TTATGCAATCTGAAAAAACTAGAGACACTAAGTCTCAACAACAATCACCTGAGAGAGCTACCGTCTTCCTTCGGGCAGCT
GTCGGCTCTGAAGACCCTGAGCCTCTCTGGGAATCAGCTGGGAGCATTACCACCCCAGCTTTGTAGCTTGAGGCATCTGG
ATGTAGTAGATCTCTCCAAAAACCAGATTCGGAGTATACCTGACACAGTCGGGGAGCTGCAGGCCATCGAACTCAATCTC
AACCAGAACCAGGTC

Library Parental gene expression (RPM)
SRP017611_liver 0 .00 RPM
SRP017611_kidney 0 .14 RPM
SRP017611_brain 0 .07 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000006482 ortholog_one2many 1 retrogene
retro_chof_2306,
Callithrix jacchus ENSCJAG00000002991 ortholog_one2many 1 retrogene
retro_cjac_2819,
Homo sapiens ENSG00000180979 ortholog_one2many 1 retrogene
retro_hsap_2163,
Gorilla gorilla ENSGGOG00000009597 ortholog_one2many 1 retrogene
retro_ggor_1718,
Loxodonta africana ENSLAFG00000005465 ortholog_one2many 2 retrogenes
retro_lafr_1027, retro_lafr_767,
Macaca mulatta ENSMMUG00000001544 ortholog_one2many 1 retrogene
retro_mmul_901,
Nomascus leucogenys ENSNLEG00000004485 ortholog_one2many 1 retrogene
retro_nleu_1812,
Otolemur garnettii ENSOGAG00000007751 ortholog_one2many 1 retrogene
retro_ogar_3437,
Pan troglodytes ENSPTRG00000006976 ortholog_one2many 2 retrogenes
retro_ptro_1649, retro_ptro_1650,
Rattus norvegicus ENSRNOG00000009143 within_species_paralog 1 retrogene
retro_rnor_796,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_1732 89.22 61.82
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Download FASTA sequences of all ENSRNOG00000048310 retrocopies