Parental gene:

ERH, ENSSSCG00000002307

Aliases:None
Description:Sus scrofa enhancer of rudimentary homolog (Drosophila) (ERH), mRNA. [Source:RefSeq mRNA;Acc:NM_001185163]
Organism:Pig (Sus scrofa)
Coordinates:7:99291062..99306758(-)


>ENSSSCG00000002307
ATGTCTCACACCATTTTGCTGGTACAGCCTACCAAGAGGCCAGAAGGCAGAACTTATGCTGACTATGAATCTGTAAATGA
ATGCATGGAAGGTGTTTGTAAAATGTATGAAGAACATCTGAAGAGAATGAATCCCAACAGCCCCTCTATCACATATGATA
TCAGTCAGTTGTTTGATTTTATCGATGATCTGGCAGACCTCAGCTGCCTTGTTTACCGAGCTGATACCCAGACATACCAG
CCTTACAACAAAGACTGGATTAAAGAGAAGATCTACGTGCTCCTTCGTCGGCAGGCCCAGCAGGCCGGGAAATAG

Library Parental gene expression (RPM)
SRP014902_placenta 39 .69 RPM
SRP014902_testis 54 .32 RPM
SRP018288_heart 29 .10 RPM
SRP018288_kidney 75 .36 RPM
SRP018288_liver 57 .89 RPM
SRP018288_lung 37 .68 RPM
SRP018856_adipose 51 .91 RPM
SRP035408_brain 142 .83 RPM
SRP035408_liver 129 .75 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000017798 ortholog_one2one 4 retrogenes
retro_btau_1260, retro_btau_438, retro_btau_651, retro_btau_795,
Callithrix jacchus ENSCJAG00000014940 possible_ortholog 2 retrogenes
retro_cjac_209, retro_cjac_846,
Equus caballus ENSECAG00000019178 possible_ortholog 1 retrogene
retro_ecab_45,
Erinaceus europaeus ENSEEUG00000007758 ortholog_one2one 6 retrogenes
retro_eeur_105, retro_eeur_108, retro_eeur_115, retro_eeur_116, retro_eeur_185, retro_eeur_546,
Echinops telfairi ENSETEG00000016172 ortholog_one2one 5 retrogenes
retro_etel_1122, retro_etel_1451, retro_etel_715, retro_etel_716, retro_etel_975,
Homo sapiens ENSG00000100632 ortholog_one2one 2 retrogenes
retro_hsap_3594, retro_hsap_3799,
Myotis lucifugus ENSMLUG00000011879 possible_ortholog 1 retrogene
retro_mluc_142,
Oryctolagus cuniculus ENSOCUG00000004636 possible_ortholog 1 retrogene
retro_ocun_42,
Ochotona princeps ENSOPRG00000000086 ortholog_one2one 2 retrogenes
retro_opri_1140, retro_opri_519,
Pongo abelii ENSPPYG00000005939 ortholog_one2one 2 retrogenes
retro_pabe_2954, retro_pabe_3104,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_748 69.14 77.88
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Download FASTA sequences of all ENSSSCG00000002307 retrocopies