Parental gene:

ERH, ENSPPYG00000005939

Aliases:None
Description:enhancer of rudimentary homolog (Drosophila) [Source:HGNC Symbol;Acc:3447]
Organism:Orangutan (Pongo abelii)
Coordinates:14:70420518..70439002(-)


>ENSPPYG00000005939
ATGTCTCACACCATTTTGCTGGTACAGCCTACCAAGAGGCCAGAAGGCAGAACTTATGCTGACTATGAATCTGTGAATGA
ATGCATGGAAGGCGTTTGTAAAATGTATGAAGAACATCTGAAAAGAATGAATCCCAACAGTCCCTCTATCACCTATGACA
TCAGTCAGTTGTTTGATTTCATTGATGATCTGGCAGACCTCAGCTGCCTGGTTTACCGAGCTGATACCCAGACATACCAG
CCTTATAACAAAGACTGGATTAAAGAGAAGATCTACGTGCTCCTTCGTCGGCAGGCCCAACAGGCTGGGAAATAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 40 .75 RPM
SRP007412_cerebellum 34 .29 RPM
SRP007412_heart 20 .59 RPM
SRP007412_kidney 37 .89 RPM
SRP007412_liver 24 .70 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000017798 ortholog_one2one 4 retrogenes
retro_btau_1260, retro_btau_438, retro_btau_651, retro_btau_795,
Callithrix jacchus ENSCJAG00000014940 possible_ortholog 2 retrogenes
retro_cjac_209, retro_cjac_846,
Equus caballus ENSECAG00000019178 possible_ortholog 1 retrogene
retro_ecab_45,
Erinaceus europaeus ENSEEUG00000007758 ortholog_one2one 6 retrogenes
retro_eeur_105, retro_eeur_108, retro_eeur_115, retro_eeur_116, retro_eeur_185, retro_eeur_546,
Echinops telfairi ENSETEG00000016172 ortholog_one2one 5 retrogenes
retro_etel_1122, retro_etel_1451, retro_etel_715, retro_etel_716, retro_etel_975,
Homo sapiens ENSG00000100632 ortholog_one2one 2 retrogenes
retro_hsap_3594, retro_hsap_3799,
Myotis lucifugus ENSMLUG00000011879 possible_ortholog 1 retrogene
retro_mluc_142,
Oryctolagus cuniculus ENSOCUG00000004636 possible_ortholog 1 retrogene
retro_ocun_42,
Ochotona princeps ENSOPRG00000000086 ortholog_one2one 2 retrogenes
retro_opri_1140, retro_opri_519,
Sus scrofa ENSSSCG00000002307 ortholog_one2one 1 retrogene
retro_sscr_748,
Tursiops truncatus ENSTTRG00000013963 ortholog_one2one 2 retrogenes
retro_ttru_1671, retro_ttru_614,
Vicugna pacos ENSVPAG00000006444 ortholog_one2one 1 retrogene
retro_vpac_423,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_2954 70.71 95.19
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2. retro_pabe_3104 85.85 100.00
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Download FASTA sequences of all ENSPPYG00000005939 retrocopies