Parental gene:

GINS2, ENSSSCG00000002663

Aliases:None
Description:GINS complex subunit 2 (Psf2 homolog) [Source:HGNC Symbol;Acc:24575]
Organism:Pig (Sus scrofa)
Coordinates:6:3528007..3551972(+)


>ENSSSCG00000002663
ATGGACGCGGCCGAGGTGGAGTTTCTGGCTGAAAAGGAGCTGGTCACCATTATCCCGAACTTCAGTCTGGACAAGATCTA
CCTCATCGGGGGCGACCTGGGGCCTTTCAACCCTGGCTTACCAGTGCAGGTGCCTCTGTGGCTGGCCATCAACCTGAAAC
AAAGACAGAAGTGCCGGCTGCTCGCTCCCGAGTGGATGGACGTAGAGAAGTTGGAGAAGATGAGGGACCATGAGCGGAAG
GAAGACACTTTTACGCCTGCGCCCAACCCTCACTACACGGAACTCACGAAGCTCCTGCTGAACCACGCCTCGGACAACAT
CCCGAAAGCCGATGAGATCCGGACCCTCATCAAGGACGTGTGGGACACTCGCGTAGCCAAGCTGCGCGTGTCTGCGGACA
GCTTCGTGAGGCAGCAGGAGGCACACGCCAAGCTGGACAACCTGACGCTGATGGAGGTCAACGCCGGCGGCGCCTTCCTC
ACGCGGGCGCTCAGCCACATGTTCAAGCTCCGCACGAACCTGCAGCCCGCCGACAGCGCCCCCACTCAGGACCTGTAG

Library Parental gene expression (RPM)
SRP014902_placenta 2 .65 RPM
SRP014902_testis 7 .07 RPM
SRP018288_heart 0 .71 RPM
SRP018288_kidney 2 .46 RPM
SRP018288_liver 1 .60 RPM
SRP018288_lung 3 .67 RPM
SRP018856_adipose 0 .91 RPM
SRP035408_brain 2 .57 RPM
SRP035408_liver 3 .55 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000017303 ortholog_one2one 1 retrogene
retro_cjac_3309,
Dasypus novemcinctus ENSDNOG00000008760 ortholog_one2one 4 retrogenes
retro_dnov_1034, retro_dnov_166, retro_dnov_2424, retro_dnov_604,
Homo sapiens ENSG00000131153 ortholog_one2one 1 retrogene
retro_hsap_2477,
Gallus gallus ENSGALG00000028131 ortholog_one2one 1 retrogene
retro_ggal_22,
Gorilla gorilla ENSGGOG00000009069 ortholog_one2one 2 retrogenes
retro_ggor_1542, retro_ggor_960,
Macropus eugenii ENSMEUG00000014703 ortholog_one2one 1 retrogene
retro_meug_1479,
Microcebus murinus ENSMICG00000016691 ortholog_one2one 1 retrogene
retro_mmur_342,
Macaca mulatta ENSMMUG00000020594 ortholog_one2one 1 retrogene
retro_mmul_596,
Pongo abelii ENSPPYG00000007616 ortholog_one2one 2 retrogenes
retro_pabe_1826, retro_pabe_896,
Pan troglodytes ENSPTRG00000008430 ortholog_one2one 1 retrogene
retro_ptro_1433,
Pteropus vampyrus ENSPVAG00000004944 ortholog_one2one 1 retrogene
retro_pvam_762,
Sarcophilus harrisii ENSSHAG00000015249 ortholog_one2one 1 retrogene
retro_shar_382,
Tupaia belangeri ENSTBEG00000006220 ortholog_one2one 1 retrogene
retro_tbel_1328,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_883 54.20 69.19
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Download FASTA sequences of all ENSSSCG00000002663 retrocopies