Parental gene:

NUDT9, ENSSSCG00000009223

Aliases:None
Description:nudix (nucleoside diphosphate linked moiety X)-type motif 9 [Source:HGNC Symbol;Acc:8056]
Organism:Pig (Sus scrofa)
Coordinates:8:140656076..140684868(-)


>ENSSSCG00000009223
ATGGCCGGACGCGTCCTGGGGAAGACGTTAGCCACCGTGTCTCTCTCTGTGGCCTTGGCCTCTGTGACGCTCAAGTCCTT
GGGCTGTTGCAGCCTCACGACGTGCAGAAACTCGTTTTTATCCTGTGGGTTTCATCTTTGCTCCAACATGATGTCTGGCT
CTAATGGCACCAAAGAGAATTCCCACAACAAGGCCAGGACATCGCCTTACCCAGGCTCAAAAGTTCACCGCAGCCAGGTT
CCTAATGAGAAGGTAGGCTGGCTTGTCGAGTGGCAAGATTATAATCCTGTGGAATACACTGCAGTCTCTGTCTTGGCTGG
ACCTAGATGGGCAGATCCTCAGATCAGTGAAAGCAACTTTTCTCCCAAGTTTAATGAAAAAGATGGACCTATTGAGAGAA
AGAGCCAAAATGGCCTATATGAGGTTGAAAATGGAAGACCTCGAAATCCTGCAGGACGAACAGGACTGGTTGGTCGGGGG
CTTTTGGGGCGATGGGGCCCCAATCATGCTGCAGATCCCATCATAACAAGGTGGAAAAGGGACAGAAGTGGAAATAAAAT
CGCCCACCCCGTTTCTGGGAAAAACATCTTACAGTTTGTTGCAATAAAAAGAAAAGACTGTGGAGAATGGGCAATCCCAG
GGGGGATGGTGGATCCAGGAGAGAAAATTAGTGCCACGTTGAAAAGAGAATTTGTTGAGGAAGCTCTCAACTCATTACAG
AAGTCCAGTGCTGAGAAGAGAGAATTAGAGAAACAGTTGCACAAACTCTTCAGCCAGGAACATCTAGTGATCTATAAGGG
ATATGTTGATGATCCTCGAAACACTGATAACGCATGGATGGAGACGGAGGCCGTGAACTACCACGATGAAACAGGTGAGA
TAATGGAGAACCTTACCCTAGAAGCTGGAGATGATGCTGGAAAAGTGAAATGGGTGGATATCAATGATAAACTCAAGCTT
TATGCTAGTCACTCTCAATTCATCAAACTTGTGGCTGAGAAACGAGATGCACACTGGAGTGAGAACCCTGAAACTGACTG
CCAAGAGTTATAG

Library Parental gene expression (RPM)
SRP014902_placenta 21 .10 RPM
SRP014902_testis 29 .99 RPM
SRP018288_heart 44 .37 RPM
SRP018288_kidney 111 .41 RPM
SRP018288_liver 68 .92 RPM
SRP018288_lung 63 .84 RPM
SRP018856_adipose 42 .81 RPM
SRP035408_brain 109 .61 RPM
SRP035408_liver 241 .42 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000003244 ortholog_one2one 1 retrogene
retro_amel_612,
Bos taurus ENSBTAG00000011354 ortholog_one2one 1 retrogene
retro_btau_1112,
Canis familiaris ENSCAFG00000009529 ortholog_one2one 1 retrogene
retro_cfam_1271,
Callithrix jacchus ENSCJAG00000006159 ortholog_one2one 1 retrogene
retro_cjac_1047,
Equus caballus ENSECAG00000019556 ortholog_one2one 1 retrogene
retro_ecab_123,
Echinops telfairi ENSETEG00000019164 ortholog_one2many 1 retrogene
retro_etel_348,
Felis catus ENSFCAG00000003315 ortholog_one2one 1 retrogene
retro_fcat_1509,
Homo sapiens ENSG00000170502 ortholog_one2one 1 retrogene
retro_hsap_709,
Gorilla gorilla ENSGGOG00000014777 ortholog_one2one 1 retrogene
retro_ggor_602,
Loxodonta africana ENSLAFG00000011391 ortholog_one2one 1 retrogene
retro_lafr_224,
Macropus eugenii ENSMEUG00000012123 ortholog_one2one 4 retrogenes
retro_meug_1072, retro_meug_1345, retro_meug_1758, retro_meug_2162,
Monodelphis domestica ENSMODG00000020738 ortholog_one2many 2 retrogenes
retro_mdom_157, retro_mdom_706,
Mustela putorius furo ENSMPUG00000002258 ortholog_one2one 1 retrogene
retro_mputfur_585,
Nomascus leucogenys ENSNLEG00000009520 ortholog_one2one 1 retrogene
retro_nleu_464,
Oryctolagus cuniculus ENSOCUG00000002670 ortholog_one2one 2 retrogenes
retro_ocun_1045, retro_ocun_990,
Ochotona princeps ENSOPRG00000004055 ortholog_one2one 1 retrogene
retro_opri_1152,
Pongo abelii ENSPPYG00000014914 ortholog_one2one 1 retrogene
retro_pabe_613,
Pan troglodytes ENSPTRG00000016259 ortholog_one2one 1 retrogene
retro_ptro_506,
Pteropus vampyrus ENSPVAG00000004829 ortholog_one2one 1 retrogene
retro_pvam_475,
Tursiops truncatus ENSTTRG00000004207 ortholog_one2one 1 retrogene
retro_ttru_1549,
Vicugna pacos ENSVPAG00000004012 ortholog_one2one 1 retrogene
retro_vpac_125,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_447 70.40 99.14
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Download FASTA sequences of all ENSSSCG00000009223 retrocopies