Parental gene:

ENSMODG00000020738

Aliases:None
Description:None
Organism:Opossum (Monodelphis domestica)
Coordinates:5:53845658..53887504(-)


>ENSMODG00000020738
ATGGCAGCACGCGGCCTGGCCCAGGCTTTAGCTACCGTGTCCCTCAGTGTGAGCCTGTGTTGCGTGACCGTCAGGGCCCT
GGGGGGGCCGCCCTACAGTAGTTGCTTTTCATCACGTTCATTCCATCTAAGCTCAGTCATTATGTCAGGTTCAAATGGTG
CTGATGAAAATTCTCACAACAAGGCTCGGACATCACCTTATCCAGGTTCAAAAGTTGAACGTAGTCAAGTACCCAATGAA
AAGGTGGGCTGGCTCGTTGAGTGGCAGGAGTATAATCCTGTGGAATATACTGCAGTCTCTGTCTTGGCTGGACCCATGTG
GGCAGATCCACAGATCAGTGAAAGAAATTTTTCTCCTAAGTTTAATGAAAAGGATGGACATGTTGAACGAAAGAGCCAGA
ATGGCTTGTATGAGATTGAAAATGGTCGACCTAGAAATCCTGCAGGTCGGACAGGACTGGTAGGCCGGGGACTTTTGGGA
CGTTGGGGCCCAAACCATGCTGCAGATCCCATTATTACTAGGTGGAAAAGGGACAGCAGTGGAAATAAAGTCATTCACCC
TCATTCTGGGAAAAATATCTTACAATTTGTAGCAATCAAAAGGAAAGACTGTGGAGAATGGGCAATCCCAGGGGGGATGG
TGGATCCAGGAGAGAAAATCAGTGCTACCTTGAAACGAGAGTTTGGTGAAGAAGCTATGAACTCCTTACAGAAATCCACT
GCTGAGAAGCAGGAGATGGAGGAGCAATTACATAAACTCTTCAGTCAAGAACATTTAGTGGTTTATAAAGGATATGTGGA
TGATCCTCGAAATACTGATAATGCGTGGATGGAGACGGAAGCTGTGAATTATCATGATGAAACAGGTGAGACAATGGATA
ATCTGGCTCTGGAAGCAGGAGATGATGCTGGGAAAGTCAAATGGGTGGACATCAGTGATAAACTCAAGCTTTATGCCAGC
CATTCCCAGTTCATCAAACTTGTGGCTGAGAAACGTGGAGCTCACTGGAGTGAGGACTCAGACACTGGCTGCCATGGATG
A

Library Parental gene expression (RPM)
SRP007412_brain 0 .00 RPM
SRP007412_cerebellum 0 .00 RPM
SRP007412_heart 0 .00 RPM
SRP007412_kidney 0 .00 RPM
SRP007412_liver 0 .00 RPM
SRP007412_testis 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000003244 ortholog_one2many 1 retrogene
retro_amel_612,
Bos taurus ENSBTAG00000011354 ortholog_one2many 1 retrogene
retro_btau_1112,
Canis familiaris ENSCAFG00000009529 ortholog_one2many 1 retrogene
retro_cfam_1271,
Callithrix jacchus ENSCJAG00000006159 ortholog_one2many 1 retrogene
retro_cjac_1047,
Ciona savignyi ENSCSAVG00000008837 possible_ortholog 1 retrogene
retro_csav_15,
Equus caballus ENSECAG00000019556 ortholog_one2many 1 retrogene
retro_ecab_123,
Echinops telfairi ENSETEG00000019164 ortholog_many2many 1 retrogene
retro_etel_348,
Felis catus ENSFCAG00000003315 ortholog_one2many 1 retrogene
retro_fcat_1509,
Homo sapiens ENSG00000170502 ortholog_one2many 1 retrogene
retro_hsap_709,
Gorilla gorilla ENSGGOG00000014777 ortholog_one2many 1 retrogene
retro_ggor_602,
Loxodonta africana ENSLAFG00000011391 ortholog_one2many 1 retrogene
retro_lafr_224,
Macropus eugenii ENSMEUG00000012123 ortholog_one2one 4 retrogenes
retro_meug_1072, retro_meug_1345, retro_meug_1758, retro_meug_2162,
Mustela putorius furo ENSMPUG00000002258 ortholog_one2many 1 retrogene
retro_mputfur_585,
Nomascus leucogenys ENSNLEG00000009520 ortholog_one2many 1 retrogene
retro_nleu_464,
Oryctolagus cuniculus ENSOCUG00000002670 ortholog_one2many 2 retrogenes
retro_ocun_1045, retro_ocun_990,
Ochotona princeps ENSOPRG00000004055 ortholog_one2many 1 retrogene
retro_opri_1152,
Pongo abelii ENSPPYG00000014914 ortholog_one2many 1 retrogene
retro_pabe_613,
Pan troglodytes ENSPTRG00000016259 ortholog_one2many 1 retrogene
retro_ptro_506,
Pteropus vampyrus ENSPVAG00000004829 ortholog_one2many 1 retrogene
retro_pvam_475,
Sus scrofa ENSSSCG00000009223 ortholog_one2many 1 retrogene
retro_sscr_447,
Tursiops truncatus ENSTTRG00000004207 ortholog_one2many 1 retrogene
retro_ttru_1549,
Vicugna pacos ENSVPAG00000004012 ortholog_one2many 1 retrogene
retro_vpac_125,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_157 81.82 89.02
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2. retro_mdom_706 86.39 84.68
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Download FASTA sequences of all ENSMODG00000020738 retrocopies