Parental gene:

THOC7, ENSSSCG00000011491

Aliases:None
Description:THO complex 7 homolog (Drosophila) [Source:HGNC Symbol;Acc:29874]
Organism:Pig (Sus scrofa)
Coordinates:13:49812375..49833306(-)


>ENSSSCG00000011491
ATGGGAGCCGTGACTGACGACGAAGTCATAAGGAAGCGTCTCCTAATTGATGGAGATGGTGCTGGAGATGATCGGAGAAT
TAATCTGCTAGTGAAAAGTTTCATTAAATGGTGCAACTCTGGATCCCAGGAAGAAGGATACAGCCAATACCAACGTATGC
TGAGCACACTGTCCCAATGCGAATTTTCAATGGGTAAAACTTTGCTGGTATATGACATGAATCTCAGAGAAATGGAAAAT
TATGAAAAAATTTACAAAGAAATAGAATGTAGTATTGCTGGAGCACATGAAAAAATTGCTGAGTGCAAAAAGCAAATTCT
TCAGGCAAAACGAATACGAAAAAATCGCCAAGAATATGATGCTTTGGCAAAAGTGATCCAGCATCATCCAGACAGGCATG
AGACATTAAAGGAACTAGAGGCTCTGGGAAAAGAATTAGAGCATCTTTCACATATTAAAGAAAGTGTTGAAGATAAGCTG
GAATTAAGAAGGAAACAGTTTCACGTTCTTCTGAGTACTATCCATGAACTTCAGCAAACACTGGAAAATGATGAAAAGCT
CTCGGAAGTAGAAGAAGCTCAAGAAACAAGCATGGAAACAGATCCTAAACCATAG

Library Parental gene expression (RPM)
SRP014902_placenta 12 .21 RPM
SRP014902_testis 18 .95 RPM
SRP018288_heart 72 .45 RPM
SRP018288_kidney 56 .35 RPM
SRP018288_liver 41 .90 RPM
SRP018288_lung 29 .53 RPM
SRP018856_adipose 32 .54 RPM
SRP035408_brain 114 .37 RPM
SRP035408_liver 52 .87 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000012170 ortholog_one2one 2 retrogenes
retro_chof_2655, retro_chof_722,
Callithrix jacchus ENSCJAG00000034899 possible_ortholog 2 retrogenes
retro_cjac_354, retro_cjac_398,
Cavia porcellus ENSCPOG00000007930 ortholog_one2one 2 retrogenes
retro_cpor_1127, retro_cpor_1164,
Dasypus novemcinctus ENSDNOG00000005917 ortholog_one2one 5 retrogenes
retro_dnov_2083, retro_dnov_2129, retro_dnov_2335, retro_dnov_2374, retro_dnov_380,
Loxodonta africana ENSLAFG00000001987 ortholog_one2one 2 retrogenes
retro_lafr_585, retro_lafr_774,
Myotis lucifugus ENSMLUG00000012060 possible_ortholog 1 retrogene
retro_mluc_369,
Oryctolagus cuniculus ENSOCUG00000021860 possible_ortholog 1 retrogene
retro_ocun_124,
Otolemur garnettii ENSOGAG00000024865 ortholog_one2one 1 retrogene
retro_ogar_2733,
Sorex araneus ENSSARG00000013894 possible_ortholog 1 retrogene
retro_sara_41,
Tupaia belangeri ENSTBEG00000007069 possible_ortholog 1 retrogene
retro_tbel_49,
Tursiops truncatus ENSTTRG00000013618 ortholog_one2one 3 retrogenes
retro_ttru_1365, retro_ttru_23, retro_ttru_957,
Vicugna pacos ENSVPAG00000010083 ortholog_one2one 1 retrogene
retro_vpac_68,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_1182 50.42 56.37
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Download FASTA sequences of all ENSSSCG00000011491 retrocopies