Parental gene:

ENSSSCG00000014371

Aliases:None
Description:NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Source:UniProtKB/TrEMBL;Acc:F1RGE3]
Organism:Pig (Sus scrofa)
Coordinates:2:148302943..148304923(-)


>ENSSSCG00000014371
ATGGCGGCAGCCGCAGCGAGTCGAGGTATCCGCGCCAAATTGGGCCTGCGGGAGATTCGCATCCACTTATGTCAGCGCTC
TCCCGGCAGCCAGGGCGTCAGGGACTTCATCGAGAAACGCTATGTGGAGCTGAAGAAGGCGAACCCCGACCTGCCCATCC
TCATCCGCGAGTGCTCTGATGTGCAGCCCAAGCTCTGGGCTCGCTACGCATTTGGCCAAGAGAAGAATGTCTCTTTGAAC
AACTTCAGTGCTGATCAGGTAACCAGAACCCTGGAGAATGTGCTAAGTGGCAAAGCCTGA

Library Parental gene expression (RPM)
SRP014902_placenta 23 .23 RPM
SRP014902_testis 34 .09 RPM
SRP018288_heart 39 .68 RPM
SRP018288_kidney 35 .76 RPM
SRP018288_liver 23 .03 RPM
SRP018288_lung 5 .91 RPM
SRP018856_adipose 30 .96 RPM
SRP035408_brain 15 .37 RPM
SRP035408_liver 7 .72 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000015041 ortholog_many2many 2 retrogenes
retro_btau_124, retro_btau_151,
Canis familiaris ENSCAFG00000005861 possible_ortholog 1 retrogene
retro_cfam_1343,
Callithrix jacchus ENSCJAG00000016525 ortholog_one2many 1 retrogene
retro_cjac_3326,
Cavia porcellus ENSCPOG00000009178 ortholog_one2many 2 retrogenes
retro_cpor_1045, retro_cpor_1290,
Latimeria chalumnae ENSLACG00000005796 ortholog_one2many 1 retrogene
retro_lcha_48,
Mus musculus ENSMUSG00000014294 ortholog_one2many 1 retrogene
retro_mmus_2579,
Nomascus leucogenys ENSNLEG00000009325 possible_ortholog 1 retrogene
retro_nleu_67,
Otolemur garnettii ENSOGAG00000027727 possible_ortholog 1 retrogene
retro_ogar_1633,
Pongo abelii ENSPPYG00000015860 possible_ortholog 1 retrogene
retro_pabe_938,
Rattus norvegicus ENSRNOG00000017571 ortholog_many2many 1 retrogene
retro_rnor_262,
Tupaia belangeri ENSTBEG00000005978 ortholog_one2many 1 retrogene
retro_tbel_2688,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_48 88.89 100.00
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSSSCG00000014371 retrocopies