Parental gene:

ENSSSCG00000016695

Aliases:None
Description:None
Organism:Pig (Sus scrofa)
Coordinates:18:49630500..49645365(-)


>ENSSSCG00000016695
GGTGTGGGAGCTGCTCGATCTGGGAACCTCACGTTTATGGTGGGAGGAGTTGAAGAGGAATTTGCTGCTGCCCAAGAGCT
GCTGGGATGCATGGGCTCCAATGTGGTGTATTGTGGAGCTGTTGGGACCGGGCAGGCTGCAAAGATATGCAACAACTTGC
TGTTAGCTATAAGTATGATTGGAACTGCTGAAGCTATGAATCTGGGAATCAGGTTAGGGCTTGACCCAAAACTCTTGGCT
AAAATCCTGAATATGAGTTCAGGGCGGTGTTGGTCAAGTGACACTTACAATCCTGTACCTGGGGTGATGGATGGAGTTCC
CTCGGCTAACAACTATCAGGGCGGATTCGGAACAACGCTCATGGCTAAGGATCTGGGCCTAGCGCAAGACTCTGCCACCA
GCACGAAGAGCCCAATCCTTCTGGGCAGTCAAGCCCATCAGATCTACAGGCTGATGTGTGCGAAGGGCTACGCAAACAAA
GACTTCTCATCTGTGTTCCAGTTTCTACGAGAGGAGGAGACGTTCTGA

Library Parental gene expression (RPM)
SRP014902_placenta 13 .41 RPM
SRP014902_testis 45 .97 RPM
SRP018288_heart 75 .75 RPM
SRP018288_kidney 348 .32 RPM
SRP018288_liver 221 .00 RPM
SRP018288_lung 21 .69 RPM
SRP018856_adipose 219 .73 RPM
SRP035408_brain 11 .66 RPM
SRP035408_liver 127 .08 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000005849 possible_ortholog 1 retrogene
retro_amel_678,
Choloepus hoffmanni ENSCHOG00000003153 ortholog_one2many 1 retrogene
retro_chof_1225,
Dasypus novemcinctus ENSDNOG00000008640 ortholog_one2many 2 retrogenes
retro_dnov_1465, retro_dnov_1997,
Microcebus murinus ENSMICG00000000512 ortholog_one2many 1 retrogene
retro_mmur_1059,
Mus musculus ENSMUSG00000029776 possible_ortholog 1 retrogene
retro_mmus_2360,
Oryctolagus cuniculus ENSOCUG00000010349 possible_ortholog 1 retrogene
retro_ocun_1896,
Ictidomys tridecemlineatus ENSSTOG00000004108 possible_ortholog 1 retrogene
retro_itri_395,
Tarsius syrichta ENSTSYG00000014191 possible_ortholog 1 retrogene
retro_tsyr_1136,
Tursiops truncatus ENSTTRG00000015276 ortholog_one2one 4 retrogenes
retro_ttru_124, retro_ttru_150, retro_ttru_589, retro_ttru_807,
Vicugna pacos ENSVPAG00000012531 possible_ortholog 1 retrogene
retro_vpac_571,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_792 69.32 50.29
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Download FASTA sequences of all ENSSSCG00000016695 retrocopies