Parental gene: | FAM50A, ENSSTOG00000004448 |
| Aliases: | None |
| Description: | family with sequence similarity 50, member A [Source:HGNC Symbol;Acc:18786] |
| Organism: | Squirrel (Ictidomys tridecemlineatus) |
| Coordinates: | JH393619.1:1195547..1201766(+) |
>ENSSTOG00000004448
ATGGCTCAGTACAAGGGCGCCGCGAGCGAGGCAGGCCGCGCCATGCATCTGATGAAGAAACGGGAAAAGCAGCGGGAGCA
GATGGAGCAGATGAAGCAGCGGATCGCAGAGGAGAACATAATGAAATCCAACATTGACAAGAAGTTCTCTGCACACTACG
ATGCTGTGGAGGCAGAGCTCAAGTCCAGCACCGTGGGTCTTGTGACCCTGAATGACATGAAAGCCAAACAGGAAGCACTG
GTGAAGGAGCGGGAGAAGCAGCTGGCCAAGAAGGAGCAGTCAAAAGAGCTGCAGCTAAAGCTGGAGAAGCTTCGAGAAAA
AGAGCGCAAGAAGGAGGCCAAGCGGAAGATCTCTAGCCTGTCCTTCACCTTGGAGGAAGAAGAGGAGGGAGGCGAAGAGG
AGGAGGAGGTGGCCATGTATGAGGAGGAGCTGGAAAGGGAAGAGATCACCACAAAGAAAAGGAAATTGGGGAAGAACCCA
GATGTGGACACCAGCTTCTTACCTGACCGAGATAGGGAGGAGGAGGAAAATCGTCTCCGGGAAGAGCTGCGGCAGGAGTG
GGAAGCCAAGCAGGAGAAGATTAAGAGTGAAGAGATTGAAATCACCTTCAGTTACTGGGATGGCTCTGGACACCGGCGGA
CAGTCAAAATGAAAAAGGGCAATACAATGCAGCAGTTCCTCCAGAAGGCACTTGAGATCCTGCGTAAAGACTTCAGTGAG
CTCAGGTCAGCAGGGGTGGAGCAGCTCATGTACATCAAGGAGGACTTAATCATTCCCCATCATCACAGTTTCTATGACTT
CATCGTTACCAAGGCACGTGGGAAGAGTGGGCCACTCTTTAACTTTGATGTTCATGATGATGTGCGGCTACTCAGCGATG
CCACTGTGGAGAAGGATGAATCTCATGCAGGAAAGGTGGTGCTGAGGAGCTGGTATGAGAAGAACAAGCACATCTTCCCT
GCCAGCCGCTGGGAGCCCTATGACCCTGAAAAGAAGTGGGACAAGTATACGGTGAGG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000000273 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000011399 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000071859 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000008766 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000022234 | ortholog_one2many | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000009476 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000001962 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000014266 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000045790 | ortholog_one2many | 1 retrogene | |
| Sorex araneus | ENSSARG00000006465 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000025303 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_itri_105 | 79.35 | 100.00 | Please wait, loading  |
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| 2. | retro_itri_184 | 78.42 | 55.46 | Please wait, loading |
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| 3. | retro_itri_1563 | 82.30 | 89.38 | Please wait, loading |
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| 4. | retro_itri_1688 | 78.53 | 56.05 | Please wait, loading |
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| 5. | retro_itri_1691 | 76.76 | 99.71 | Please wait, loading |
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| 6. | retro_itri_1693 | 79.27 | 56.34 | Please wait, loading |
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| 7. | retro_itri_1758 | 76.45 | 80.53 | Please wait, loading |
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| 8. | retro_itri_1760 | 75.74 | 99.12 | Please wait, loading |
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| 9. | retro_itri_1762 | 76.18 | 99.71 | Please wait, loading |
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| 10. | retro_itri_1780 | 77.06 | 99.71 | Please wait, loading |
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Download FASTA sequences of all ENSSTOG00000004448 retrocopies