Parental gene: | HTATIP2, ENSSTOG00000011216 |
| Aliases: | None |
| Description: | HIV-1 Tat interactive protein 2, 30kDa [Source:HGNC Symbol;Acc:16637] |
| Organism: | Squirrel (Ictidomys tridecemlineatus) |
| Coordinates: | JH393464.1:1316041..1331961(+) |
>ENSSTOG00000011216
AAACCCAAGCTGCCGAAGCTTCGGGAAGACTTCAAGATGCAGAATAAATCCGTCTTTATCCTGGGCGCCAGCGGGGAAAG
TGGCAAAGTGCTGTTAAAAGAAATCCTGGAACAGAACCTGTTTGCCAGAGTCACTCTGATTGGCCGGAGGGAGCTCTCCT
TCGAGGAAGAAGCATATAAAAACGTGAATCAAGAAGTGGTGGACTTTGAAAAATTGGAAGACTATGCTTCTGCCTTTCAA
GGTCATGATGTTGGATTCTGTTGCCTGGGTACCACCAGAAGCAAAGCTGGTGCGGAGGGATTTGTTCGTGTTGACCGAGA
TTATGTGCTGAAGTCTGCAGAGCTGGCAAAATCTGGAGGGTGCAAACATTTCAATTTGCTGTCTTCTAAAGGAGCTGATA
AGTCAAGCAATTTTTTATATTTACAAGTTAAGGGAGAAGTAGAAGCCAGGGTTGGAGAATTAAAATTTGATCGCTACTCC
ATATTTAGACCTGGAGTTCTGTTATGCAATAGGCAAGAATCTCGCCCAGGTGAATGGTTGATTAGGAAGTTCTTTGGCTT
CTTACCAGACTCTTGGGCCAGTGGGCACTCTGTGCCTGTCTTGACTTTGGCTAGAGCAATGCTGAACAACATGGTGAGAC
CAAGTGACAAGCAGATGGAAATTCTGGACAACAAGGCCATCCACGAGCTGGGGAAAGCTCATGGTGTTCTCAAG
AAACCCAAGCTGCCGAAGCTTCGGGAAGACTTCAAGATGCAGAATAAATCCGTCTTTATCCTGGGCGCCAGCGGGGAAAG
TGGCAAAGTGCTGTTAAAAGAAATCCTGGAACAGAACCTGTTTGCCAGAGTCACTCTGATTGGCCGGAGGGAGCTCTCCT
TCGAGGAAGAAGCATATAAAAACGTGAATCAAGAAGTGGTGGACTTTGAAAAATTGGAAGACTATGCTTCTGCCTTTCAA
GGTCATGATGTTGGATTCTGTTGCCTGGGTACCACCAGAAGCAAAGCTGGTGCGGAGGGATTTGTTCGTGTTGACCGAGA
TTATGTGCTGAAGTCTGCAGAGCTGGCAAAATCTGGAGGGTGCAAACATTTCAATTTGCTGTCTTCTAAAGGAGCTGATA
AGTCAAGCAATTTTTTATATTTACAAGTTAAGGGAGAAGTAGAAGCCAGGGTTGGAGAATTAAAATTTGATCGCTACTCC
ATATTTAGACCTGGAGTTCTGTTATGCAATAGGCAAGAATCTCGCCCAGGTGAATGGTTGATTAGGAAGTTCTTTGGCTT
CTTACCAGACTCTTGGGCCAGTGGGCACTCTGTGCCTGTCTTGACTTTGGCTAGAGCAATGCTGAACAACATGGTGAGAC
CAAGTGACAAGCAGATGGAAATTCTGGACAACAAGGCCATCCACGAGCTGGGGAAAGCTCATGGTGTTCTCAAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000006718 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000018703 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000000749 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000003421 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_itri_1354 | 66.90 | 60.50 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_itri_1523 | 73.97 | 61.34 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSTOG00000011216 retrocopies