Parental gene: | RPS2, ENSSTOG00000012944 |
| Aliases: | None |
| Description: | ribosomal protein S2 [Source:HGNC Symbol;Acc:10404] |
| Organism: | Squirrel (Ictidomys tridecemlineatus) |
| Coordinates: | JH393504.1:2071489..2073391(+) |
>ENSSTOG00000012944
ATGGCGGATGACGCCGGTGCAGCGGGAGGTCCCGGAGGTCCCGGGGGCCCCGGAATGGGTGGCCGGGGCGGCTTCCGCGG
AGGCTTCGGCAGCGGTCTCCGAGGCCGCGGTCGAGGCCGTGGACGGGGCCGGGGCCGTGGCCGCGGGGCTCGTGGAGGCA
AGGCCGAAGACAAGGAGTGGATCCCGGTGACCAAGCTGGGCCGCCTGGTCAAGGACATGAAGATCAAGTCCCTGGAGGAG
ATCTATCTCTTCTCTTTGCCCATCAAGGAGTCTGAGATCATTGACTTTTTCTTGGGGGCATCACTCAAGGATGAGGTTTT
GAAGATCATGCCTGTACAGAAACAGACTCGTGCTGGCCAGCGGACCAGATTCAAGGCATTTGTAGCTATTGGGGACTACA
ACGGTCACGTTGGACTGGGAGTAAAATGCTCCAAGGAGGTAGCAACTGCTATCCGAGGGGCCATCATCCTGGCCAAGCTC
TCCATCGTTCCTGTGCGGAGAGGCTATTGGGGGAACAAGATTGGCAAGCCTCACACTGTCCCTTGCAAGGTGACAGGACG
TTGTGGTTCTGTGCTAGTACGGCTCATCCCTGCCCCCAGAGGTACTGGCATCGTCTCAGCTCCTGTACCCAAGAAGCTAC
TGATGATGGCTGGTATTGATGATTGCTACACTTCTGCCAGGGGCTGCACTGCCACCTTGGGCAATTTTGCCAAGGCCACC
TTTGATGCCATCTCCAAGACATACAGCTATTTGACCCCTGATCTCTGGAAAGAGACTGTGTTCACCAAGTCTCCTTATCA
GGTATTTCTGGAATTCACTCCATCTTGTGAAAACCCATACCAGAGTCTCTGTACAGAGGACCCAGGCTCCAGCTGTGGCT
ACAACATAGGGTTTTTACAAAAATAA
ATGGCGGATGACGCCGGTGCAGCGGGAGGTCCCGGAGGTCCCGGGGGCCCCGGAATGGGTGGCCGGGGCGGCTTCCGCGG
AGGCTTCGGCAGCGGTCTCCGAGGCCGCGGTCGAGGCCGTGGACGGGGCCGGGGCCGTGGCCGCGGGGCTCGTGGAGGCA
AGGCCGAAGACAAGGAGTGGATCCCGGTGACCAAGCTGGGCCGCCTGGTCAAGGACATGAAGATCAAGTCCCTGGAGGAG
ATCTATCTCTTCTCTTTGCCCATCAAGGAGTCTGAGATCATTGACTTTTTCTTGGGGGCATCACTCAAGGATGAGGTTTT
GAAGATCATGCCTGTACAGAAACAGACTCGTGCTGGCCAGCGGACCAGATTCAAGGCATTTGTAGCTATTGGGGACTACA
ACGGTCACGTTGGACTGGGAGTAAAATGCTCCAAGGAGGTAGCAACTGCTATCCGAGGGGCCATCATCCTGGCCAAGCTC
TCCATCGTTCCTGTGCGGAGAGGCTATTGGGGGAACAAGATTGGCAAGCCTCACACTGTCCCTTGCAAGGTGACAGGACG
TTGTGGTTCTGTGCTAGTACGGCTCATCCCTGCCCCCAGAGGTACTGGCATCGTCTCAGCTCCTGTACCCAAGAAGCTAC
TGATGATGGCTGGTATTGATGATTGCTACACTTCTGCCAGGGGCTGCACTGCCACCTTGGGCAATTTTGCCAAGGCCACC
TTTGATGCCATCTCCAAGACATACAGCTATTTGACCCCTGATCTCTGGAAAGAGACTGTGTTCACCAAGTCTCCTTATCA
GGTATTTCTGGAATTCACTCCATCTTGTGAAAACCCATACCAGAGTCTCTGTACAGAGGACCCAGGCTCCAGCTGTGGCT
ACAACATAGGGTTTTTACAAAAATAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Anolis carolinensis | ENSACAG00000002549 | ortholog_one2many | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000004508 | possible_ortholog | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000016077 | possible_ortholog | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000008877 | ortholog_one2many | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000015213 | possible_ortholog | 5 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_itri_221 | 58.82 | 54.82 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_itri_1239 | 66.67 | 76.08 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_itri_1666 | 93.75 | 90.03 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_itri_1680 | 57.92 | 59.80 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSTOG00000012944 retrocopies