Parental gene:

PSMA6, ENSTBEG00000011241

Aliases:None
Description:proteasome (prosome, macropain) subunit, alpha type, 6 [Source:HGNC Symbol;Acc:9535]
Organism:Treeshrew (Tupaia belangeri)
Coordinates:GeneScaffold_3257:236633..269893(+)


>ENSTBEG00000011241
ATGTCCCGTGGTTCCAGCGCTGGTTTTGACCGCCACATTACCATTTTTTCACCCGAGGGCCGGCTCTACCAAGTAGAATA
TGCTTTCAAGGCTATTAACCAGGGTGGCCTTACATCAGTAGCTGTGAGAGGGAAAGACTGTGCAGTAATTGTCACACAGA
AAAAAGTTCCTGACAAATTATTGGATTCCAGCACAGTGACTCACTTGTTCAAGATAACTGAAAACATTGGCTGTGTGATG
ACAGGAATGACAGCTGACAGCCGATCCCAGGTACAGAGGGCACGCTATGAGGCAGCTAATTGGAAATACAAGTATGGTTA
TGAGATTCCTGTGGACATGCTGTGTAAAAGAATTGCTGATATTTCTCAGGTCTACACACAGAATGCTGAGATGAGGCCTC
TTGGTTGTTGTATGATAGGTATAGATGAAGAACAAGGTCAGGTGTACAAGTGTGATCCTGCAGGTTACTACTGTGGGTTT
AAAGCCACTGCCGCAGGAGTTAAACAAACTGAGTCAACCAGTTTCCTTGAAAAAAAAGTGAAGAAGAAATTTGATTGGAC
ATTTGAACAGACAGTGGAAACTGCAATTACATGTCTTTCTACTGTTCTGTCAATTGATTTCAAACCTTCAGAAATAGAAG
TAACAGTTGAAAATCCTAAATTCAGGATTCCCCCAGAAGCAGAGATTGATGCTCACCTTGTTGCTCTAGCAGAGAGAGAT
TAA

Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000013409 ortholog_one2one 2 retrogenes
retro_cfam_1581, retro_cfam_743,
Echinops telfairi ENSETEG00000004892 ortholog_one2one 1 retrogene
retro_etel_1775,
Felis catus ENSFCAG00000026276 ortholog_one2one 1 retrogene
retro_fcat_973,
Homo sapiens ENSG00000100902 ortholog_one2one 2 retrogenes
retro_hsap_1228, retro_hsap_4923,
Macropus eugenii ENSMEUG00000016537 ortholog_one2one 1 retrogene
retro_meug_1217,
Microcebus murinus ENSMICG00000000083 ortholog_one2one 4 retrogenes
retro_mmur_104, retro_mmur_165, retro_mmur_752, retro_mmur_80,
Myotis lucifugus ENSMLUG00000010228 ortholog_one2one 1 retrogene
retro_mluc_822,
Macaca mulatta ENSMMUG00000016544 ortholog_one2many 1 retrogene
retro_mmul_343,
Mustela putorius furo ENSMPUG00000016288 ortholog_one2one 1 retrogene
retro_mputfur_1089,
Mus musculus ENSMUSG00000021024 ortholog_one2one 1 retrogene
retro_mmus_654,
Otolemur garnettii ENSOGAG00000008492 ortholog_one2one 10 retrogenes
retro_ogar_1273, retro_ogar_1397, retro_ogar_1928, retro_ogar_1950, retro_ogar_2021, retro_ogar_2073, retro_ogar_2274, retro_ogar_2488, retro_ogar_2521, retro_ogar_3089,
Pan troglodytes ENSPTRG00000006264 ortholog_one2one 2 retrogenes
retro_ptro_3297, retro_ptro_844,
Rattus norvegicus ENSRNOG00000007114 ortholog_one2one 4 retrogenes
retro_rnor_1724, retro_rnor_1960, retro_rnor_854, retro_rnor_924,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_tbel_509 87.80 100.00
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2. retro_tbel_602 90.65 100.00
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3. retro_tbel_725 70.19 63.75
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4. retro_tbel_1304 82.58 53.33
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5. retro_tbel_1415 90.48 60.42
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6. retro_tbel_1789 83.06 74.58
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7. retro_tbel_2028 93.20 60.00
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8. retro_tbel_2466 81.06 53.33
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9. retro_tbel_2519 81.61 70.42
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10. retro_tbel_3227 89.43 99.58
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11. retro_tbel_3280 68.37 83.75
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12. retro_tbel_3535 94.78 55.42
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13. retro_tbel_4181 83.33 58.33
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14. retro_tbel_4183 74.68 63.75
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15. retro_tbel_4357 75.89 57.92
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16. retro_tbel_4465 86.34 72.50
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17. retro_tbel_4495 78.29 52.50
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Download FASTA sequences of all ENSTBEG00000011241 retrocopies