Parental gene:

RPF2, ENSTBEG00000017151

Aliases:None
Description:ribosome production factor 2 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:20870]
Organism:Treeshrew (Tupaia belangeri)
Coordinates:GeneScaffold_3434:47574..247353(+)


>ENSTBEG00000017151
ATGGACGCTTTGGATCGAGTTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATG
CACTGAAGAAACCGTATGGTGTTATGTATAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAATTC
TTTTCAAAGAAGTCGGATTGTTCTTTATTCATGTTTGGCTCCCATAATAAAAAGCGGCCAAATAATCTGGTAATAGGTCG
TATGTATGACTATCATGTGCTGGATATGATTGAATTAGGCATTGAGAAGTTTGTATCTCTAAAAGATATTAAGAATACAA
AATGTCCTGAAGGAACAAAACCCATGCTAGTATTTGCTGGTAATGATTTTGATGCAACAGAGGACTACAGAAGACTAAAA
AGTCTTCTTATTGATTTCTTCAGGGGCCCCACAGTATCAAATATCCGCCTGGCTGGATTAGAGTATGTTCTGCACTTCAC
TGCATGGAATGGGAAGATTTACCTGCGAAGTTATAAGTTGCTATTGAAGAAATCTGGTTGCAGAACGCCACGGATTGAGT
TGGAAGAGATGGGACCGTCGCTGGATCTGGTTCTCAGGAGGACACACCTGGCATCTGATGACCTCTATAAGTTATCTATG
AAAATGCCAAAAGCTCTCAAGCCAAAGAAGAAGAAGAATATCTCTCATGATACTTTTGGTACAACTTACGGAAGGATTCA
TATGCAGAAGCAAGACCTGAGCAAGCTGCAAACCAGAAAGATGAAGGGGTTGAAGAAACGGCCTGCAGAAAGAATATCAG
AAGACCCGGAGAAAAGATCAAAGAGAATTAAAAAAAATTGA

Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000003918 ortholog_one2one 2 retrogenes
retro_cfam_1611, retro_cfam_903,
Callithrix jacchus ENSCJAG00000005212 ortholog_one2one 6 retrogenes
retro_cjac_1675, retro_cjac_1768, retro_cjac_2244, retro_cjac_2473, retro_cjac_606, retro_cjac_933,
Cavia porcellus ENSCPOG00000006797 ortholog_one2one 2 retrogenes
retro_cpor_332, retro_cpor_582,
Equus caballus ENSECAG00000017121 ortholog_one2one 1 retrogene
retro_ecab_782,
Erinaceus europaeus ENSEEUG00000006169 ortholog_one2one 2 retrogenes
retro_eeur_454, retro_eeur_584,
Felis catus ENSFCAG00000001527 ortholog_one2one 1 retrogene
retro_fcat_1584,
Homo sapiens ENSG00000197498 ortholog_one2one 1 retrogene
retro_hsap_2425,
Gorilla gorilla ENSGGOG00000001469 ortholog_one2many 1 retrogene
retro_ggor_83,
Myotis lucifugus ENSMLUG00000005676 ortholog_one2one 2 retrogenes
retro_mluc_485, retro_mluc_921,
Macaca mulatta ENSMMUG00000021532 ortholog_one2one 1 retrogene
retro_mmul_1903,
Mus musculus ENSMUSG00000038510 ortholog_one2one 1 retrogene
retro_mmus_2234,
Nomascus leucogenys ENSNLEG00000012854 ortholog_one2one 3 retrogenes
retro_nleu_2024, retro_nleu_2434, retro_nleu_2445,
Oryctolagus cuniculus ENSOCUG00000016028 ortholog_one2one 1 retrogene
retro_ocun_831,
Pongo abelii ENSPPYG00000016925 ortholog_one2one 2 retrogenes
retro_pabe_1788, retro_pabe_2464,
Pan troglodytes ENSPTRG00000018503 ortholog_one2one 1 retrogene
retro_ptro_1398,
Rattus norvegicus ENSRNOG00000000587 ortholog_one2one 1 retrogene
retro_rnor_2336,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_tbel_1824 85.54 81.37
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2. retro_tbel_2243 85.43 83.01
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3. retro_tbel_2376 81.75 82.35
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4. retro_tbel_2576 83.00 82.68
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5. retro_tbel_3547 61.54 50.98
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6. retro_tbel_3635 89.33 73.53
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7. retro_tbel_3803 83.79 82.68
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8. retro_tbel_3876 81.22 58.82
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9. retro_tbel_4509 66.48 57.52
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Download FASTA sequences of all ENSTBEG00000017151 retrocopies