Parental gene:

HNRNPC, ENSTSYG00000003305

Aliases:None
Description:heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:5035]
Organism:Tarsier (Tarsius syrichta)
Coordinates:GeneScaffold_1155:10075..23596(-)


>ENSTSYG00000003305
ATGGCTAGCAATGTTACCAACAAGACAGATCCTCGCTCCATGAACTCCCGTGTATTCATCGGGAATCTTAACACTCTTGT
GGTCAAGAAGTCTGATGTGGAGGCAATTTTTTCGAAGTATGGCAAAATTGTGGGTTGCTCTGTTCATAAGGGCTTTGCCT
TCGTTCAGTATGTTAATGAGAGGAATGCCCGGGCTGCTGTAGCAGGAGAGGATGGCAGAATGATTGCTGGCCAGGTTTTA
GATATTAATCTGGCTGCAGAGCCAAAAGTGAACCGAGGAAAAGCAGGTGTGAAACGATCTGCAGCGGAGATGTACGGGTC
AGTACCAGAACACCCTTCTCCGTCCCCTCTACTCAGCTCCTCTTTTGACTTGGACTACGACTTTCAGCGGGATTATTATG
ACAGGATGTACAGTTACCCAGCACGAGTTCCTCCTCCTCCTCCTATTGCTCGGGCTGTAGTGCCCTCGAAACGCCAGCGT
GTATCAGGAAACACCTCACGAAGGGGCAAAAGTGGCTTCAATTCTAAGAGTGGTCAGCGAGGATCTTCTTCCAAGTCTGG
AAAGTTGAAAGGTGATGACATTCAGGCCATTAAGAAGGAACTGTCTCAGATAAAGCAAAAAGTGGATTCTCTGCTGGAAA
ACCTGGAAAAAATTGAAAAGGAACAGAGCAAACAAGCAGTGGAGATGAAGAATGATAAGGTAGAAGAGGAGCAAACTACC
ACCTCCGTGAAGAAAGATGAAACTAACGTGAAGATGGAGTCTGAGGGGGGTGCAGATGACTCTGCTGAGGAGGGGGACCT
ACTGGATGATGATGATAATGAAGATCGGGGGGATGACCAGCTGGAGTTGATCAAGGATGATGAAAAAGAGGCTGAGGAAG
GAGAGGATGACAGAGACAGCGCCAATGGCGAGGATGACTCTTAA

Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000005504 possible_ortholog 1 retrogene
retro_cfam_1140,
Homo sapiens ENSG00000092199 ortholog_one2one 2 retrogenes
retro_hsap_1624, retro_hsap_3740,
Gorilla gorilla ENSGGOG00000023015 ortholog_one2one 1 retrogene
retro_ggor_1046,
Macaca mulatta ENSMMUG00000014809 ortholog_one2one 4 retrogenes
retro_mmul_1112, retro_mmul_205, retro_mmul_468, retro_mmul_503,
Mustela putorius furo ENSMPUG00000000164 possible_ortholog 2 retrogenes
retro_mputfur_231, retro_mputfur_241,
Mus musculus ENSMUSG00000060373 ortholog_one2one 1 retrogene
retro_mmus_1388,
Nomascus leucogenys ENSNLEG00000014362 ortholog_one2one 2 retrogenes
retro_nleu_1828, retro_nleu_59,
Oryctolagus cuniculus ENSOCUG00000015029 possible_ortholog 1 retrogene
retro_ocun_138,
Otolemur garnettii ENSOGAG00000012543 ortholog_one2many 1 retrogene
retro_ogar_165,
Pongo abelii ENSPPYG00000005593 ortholog_one2one 6 retrogenes
retro_pabe_1116, retro_pabe_1263, retro_pabe_1342, retro_pabe_2, retro_pabe_722, retro_pabe_780,
Pan troglodytes ENSPTRG00000006118 ortholog_one2one 2 retrogenes
retro_ptro_1089, retro_ptro_2539,
Rattus norvegicus ENSRNOG00000011621 ortholog_one2many 1 retrogene
retro_rnor_922,
Tupaia belangeri ENSTBEG00000011514 possible_ortholog 11 retrogenes
retro_tbel_1738, retro_tbel_2114, retro_tbel_2475, retro_tbel_2838, retro_tbel_2849, retro_tbel_3094, retro_tbel_3293, retro_tbel_3776, retro_tbel_3903, retro_tbel_3937, retro_tbel_818,
Tursiops truncatus ENSTTRG00000016055 ortholog_one2one 2 retrogenes
retro_ttru_1299, retro_ttru_1490,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_tsyr_1004 87.43 59.28
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2. retro_tsyr_1326 90.12 55.37
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3. retro_tsyr_1411 59.70 63.84
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Download FASTA sequences of all ENSTSYG00000003305 retrocopies