Parental gene: | LPERR03G03650 |
| Aliases: | None |
| Description: | None |
| Organism: | Leersia perrieri |
| Coordinates: | 3:2667925..2671717(-) |
>LPERR03G03650
ATGGCGAGCCAGGGAGAGCCCTCCTCATCCGATCCGAAGGGGAAGAAGGATTACTCGACGGCGATCCTAGAGAGGAAGAA
GTCGCCGAATCGGTTGGTGGTCGATGAGGCTGCCAATGATGATAACTCTGTCATCGGGATGCACCCTGACACCATGGAGA
GGCTCCAGCTTTTCCGCGGCGATACTGTGCTGCTCAAGGGTAAGAAGAGAAAAGACACAATCTGCATTGTGCTTGCGGAT
GACACTTGCGAGGAGCCGAAGATCAGAATGAACAAGGTTGTCAGGAAGAACCTGAGAGTGCGACTTGGTGATGTGGTTTC
TGTTCATCAATGCCCAGATGTCAAGTATGGAAAGCGTGTGCACATACTTCCAATTGATGACACAGTTGAGGGAATCACTG
GAAACTTGTTTGATGCCTTCCTGAAACCGTATTTCCTTGAAGCGTATCGTCCTTTGAGGAAAGGAGACCTTTTCCTTGTT
AGGGGTGGAATGAGGAGCGTTGAATTCAAAGTTATAGAGACTGACCCTGCAGAGTACTGCATTGTTGCACCTGATACAGA
GATCTTCTGTGATGGTGAGCCTATTAAGAGGGAGGATGAGGAAAGACTTGATGAGGTTGGTTACGACGATGTTGGTGGAG
TTAGAAAGCAGATGGCCCAAATCAGAGAACTTGTCGAGCTCCCGTTGCGCCACCCCCAACTTTTCAAGTCTATTGGTGTG
AAGCCTCCAAAGGGCATACTGCTGTATGGACCACCTGGCTCTGGCAAGACTCTTATTGCTAGAGCTGTAGCTAATGAAAC
CGGTGCATTCTTCTTCCTGATTAATGGCCCGGAGATTATGTCAAAGCTAGCAGGAGAGAGTGAGAGTAATCTTAGGAAGG
CATTTGAAGAAGCTGAGAAGAATGCACCATCAATCATCTTCATTGATGAGATCGACTCCATAGCCCCAAAGAGAGAGAAG
ACCCATGGAGAAGTTGAGAGGCGTATTGTTTCGCAGCTGTTGACTCTTATGGATGGGCTCAAAGCTCGTGCTCATGTCAT
TGTCATGGGTGCTACAAACCGGCCAAACAGTATCGATCCTGCTCTCAGAAGGTTCGGTAGGTTTGACAGGGAGATTGACA
TTGGTGTTCCTGATGAAGTTGGGCGGCTTGAAGTCCTTCGGATTCACACGAAAAATATGAAGCTGGCTGAAGATGTTGAC
CTTGAACTCATTGCCAGAGACACTCATGGGTATGTGGGTGCTGATCTTGCTGCTCTTTGCACTGAGGGTGCTCTCCAATG
CATCCGTGAGAAGATGGACATTATAGATCTTGAGGACGAGACCATAGATGCTGAGATACTGAACTCGATGGCTGTTACGA
ATGACCACTTCAAGACTGCACTAGGGACAAGCAACCCGTCTGCTCTCCGTGAAACTGTTGTTGAAGTTCCAAATGTCTCT
TGGGAAGATATCGGTGGACTGGAGAATGTCAAAAGAGAGCTGCAGGAGACTGTCCAATATCCTGTGGAGCATCCTGAGAA
ATTCGAGAAGTTTGGCATGTCTCCGTCCAAAGGTGTTCTGTTCTACGGCCCTCCTGGCTGTGGTAAGACTTTGTTGGCCA
AGGCAATTGCTAACGAGTGCCAGGCTAACTTTATTAGCGTCAAGGGACCTGAACTGCTTACCATGTGGTTTGGTGAGAGT
GAGGCCAACGTGCGTGAGATTTTTGACAAGGCCAGGCAGTCAGCTCCCTGTGTCCTCTTCTTTGATGAGCTCGACTCGAT
TGCTACCCAGAGGGGAAGCAGTGTTGGTGATGCCGGAGGTGCTGCTGACAGAGTGCTGAACCAGCTGCTGACTGAGATGG
ATGGCATGAACGCAAAGAAGACTGTGTTCATCATTGGTGCTACTAACAGGCCAGATATCATTGACCCTGCCTTGCTCAGG
CCAGGGCGTCTTGATCAGCTTATCTACATTCCTCTCCCTGATGATCAATCTAGGCTGCAGATCTTCAAAGCTTGCCTCAG
GAAGTCACCTGTGGCCAAGGATGTCGACCTGAATGCCCTAGCCAAATACACCCAGGGGTTCAGTGGTGCAGATATTACAG
AAATCTGCCAGCGTGCCTGCAAGTATGCCATCAGAGAGAACATTGAAAAGGACATCGAGAGGGAGAAGCGGAGGAAGGAC
AACCCCGAAGCCATGGAGGAGGACGAGGCGGATGAAATTGCTGAGATCAAGGCTGCTCACTTCGAGGAATCGATGAAGTA
TGCTCGCCGGAGCGTGAGCGATGCCGACATCCGCAAGTACCAGGCCTTCGCCCAGACTCTCCAGCAGTCTCGTGGATTTG
GCACCGAGTTTAGGTTCGCTGACCAGCCAGCGTCTGGCGCAGGCGCTGCGGCCGACCCCTTCTCATCCGCTGCAGCTGCA
GCTGACGATGATGATCTCTATAGTTAG
ATGGCGAGCCAGGGAGAGCCCTCCTCATCCGATCCGAAGGGGAAGAAGGATTACTCGACGGCGATCCTAGAGAGGAAGAA
GTCGCCGAATCGGTTGGTGGTCGATGAGGCTGCCAATGATGATAACTCTGTCATCGGGATGCACCCTGACACCATGGAGA
GGCTCCAGCTTTTCCGCGGCGATACTGTGCTGCTCAAGGGTAAGAAGAGAAAAGACACAATCTGCATTGTGCTTGCGGAT
GACACTTGCGAGGAGCCGAAGATCAGAATGAACAAGGTTGTCAGGAAGAACCTGAGAGTGCGACTTGGTGATGTGGTTTC
TGTTCATCAATGCCCAGATGTCAAGTATGGAAAGCGTGTGCACATACTTCCAATTGATGACACAGTTGAGGGAATCACTG
GAAACTTGTTTGATGCCTTCCTGAAACCGTATTTCCTTGAAGCGTATCGTCCTTTGAGGAAAGGAGACCTTTTCCTTGTT
AGGGGTGGAATGAGGAGCGTTGAATTCAAAGTTATAGAGACTGACCCTGCAGAGTACTGCATTGTTGCACCTGATACAGA
GATCTTCTGTGATGGTGAGCCTATTAAGAGGGAGGATGAGGAAAGACTTGATGAGGTTGGTTACGACGATGTTGGTGGAG
TTAGAAAGCAGATGGCCCAAATCAGAGAACTTGTCGAGCTCCCGTTGCGCCACCCCCAACTTTTCAAGTCTATTGGTGTG
AAGCCTCCAAAGGGCATACTGCTGTATGGACCACCTGGCTCTGGCAAGACTCTTATTGCTAGAGCTGTAGCTAATGAAAC
CGGTGCATTCTTCTTCCTGATTAATGGCCCGGAGATTATGTCAAAGCTAGCAGGAGAGAGTGAGAGTAATCTTAGGAAGG
CATTTGAAGAAGCTGAGAAGAATGCACCATCAATCATCTTCATTGATGAGATCGACTCCATAGCCCCAAAGAGAGAGAAG
ACCCATGGAGAAGTTGAGAGGCGTATTGTTTCGCAGCTGTTGACTCTTATGGATGGGCTCAAAGCTCGTGCTCATGTCAT
TGTCATGGGTGCTACAAACCGGCCAAACAGTATCGATCCTGCTCTCAGAAGGTTCGGTAGGTTTGACAGGGAGATTGACA
TTGGTGTTCCTGATGAAGTTGGGCGGCTTGAAGTCCTTCGGATTCACACGAAAAATATGAAGCTGGCTGAAGATGTTGAC
CTTGAACTCATTGCCAGAGACACTCATGGGTATGTGGGTGCTGATCTTGCTGCTCTTTGCACTGAGGGTGCTCTCCAATG
CATCCGTGAGAAGATGGACATTATAGATCTTGAGGACGAGACCATAGATGCTGAGATACTGAACTCGATGGCTGTTACGA
ATGACCACTTCAAGACTGCACTAGGGACAAGCAACCCGTCTGCTCTCCGTGAAACTGTTGTTGAAGTTCCAAATGTCTCT
TGGGAAGATATCGGTGGACTGGAGAATGTCAAAAGAGAGCTGCAGGAGACTGTCCAATATCCTGTGGAGCATCCTGAGAA
ATTCGAGAAGTTTGGCATGTCTCCGTCCAAAGGTGTTCTGTTCTACGGCCCTCCTGGCTGTGGTAAGACTTTGTTGGCCA
AGGCAATTGCTAACGAGTGCCAGGCTAACTTTATTAGCGTCAAGGGACCTGAACTGCTTACCATGTGGTTTGGTGAGAGT
GAGGCCAACGTGCGTGAGATTTTTGACAAGGCCAGGCAGTCAGCTCCCTGTGTCCTCTTCTTTGATGAGCTCGACTCGAT
TGCTACCCAGAGGGGAAGCAGTGTTGGTGATGCCGGAGGTGCTGCTGACAGAGTGCTGAACCAGCTGCTGACTGAGATGG
ATGGCATGAACGCAAAGAAGACTGTGTTCATCATTGGTGCTACTAACAGGCCAGATATCATTGACCCTGCCTTGCTCAGG
CCAGGGCGTCTTGATCAGCTTATCTACATTCCTCTCCCTGATGATCAATCTAGGCTGCAGATCTTCAAAGCTTGCCTCAG
GAAGTCACCTGTGGCCAAGGATGTCGACCTGAATGCCCTAGCCAAATACACCCAGGGGTTCAGTGGTGCAGATATTACAG
AAATCTGCCAGCGTGCCTGCAAGTATGCCATCAGAGAGAACATTGAAAAGGACATCGAGAGGGAGAAGCGGAGGAAGGAC
AACCCCGAAGCCATGGAGGAGGACGAGGCGGATGAAATTGCTGAGATCAAGGCTGCTCACTTCGAGGAATCGATGAAGTA
TGCTCGCCGGAGCGTGAGCGATGCCGACATCCGCAAGTACCAGGCCTTCGCCCAGACTCTCCAGCAGTCTCGTGGATTTG
GCACCGAGTTTAGGTTCGCTGACCAGCCAGCGTCTGGCGCAGGCGCTGCGGCCGACCCCTTCTCATCCGCTGCAGCTGCA
GCTGACGATGATGATCTCTATAGTTAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Brachypodium distachyon | BRADI1G74922 | ortholog_many2many | 1 retrogene | |
| Hordeum vulgare | MLOC_74069 | ortholog_many2many | 2 retrogenes | |
| Hordeum vulgare | MLOC_76416 | ortholog_many2many | 1 retrogene | |
| Oryza glaberrima | ORGLA06G0255900 | ortholog_one2many | 1 retrogene | |
| Populus trichocarpa | POPTR_0006s12740 | ortholog_many2many | 1 retrogene | |
| Sorghum bicolor | Sb01g046840 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_lper_1 | 85.73 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all LPERR03G03650 retrocopies