Parental gene: | MTR_4g008170 |
| Aliases: | None |
| Description: | calcium-transporting ATPase 8, plasma membrane-type protein |
| Organism: | Barrel medic (Medicago truncatula) |
| Coordinates: | 4:1429989..1449394(+) |
>MTR_4g008170
ATGGCTTCCAACGGCAACGGTAACGGCCATTTCTCCGTTACTATCGGCACCGGTCACAATGACGATGACGACGATAACAA
CAATCATCATCCTTCCGATAACAACAACCGCCGTAATGATAATGACAACAACGGCGACAACGATGAAGATGATGAACAAA
TTGATCCTGATGATCCTTTTGATATTGCTCAAACGAAGAATGCTTCTCATGAAACTCTTCGCCGTTGGAGACAAGCAGCA
CTGGTACTCAATGCGTCCAGGCGTTTTAGATATACTCTGGACTTCAAAGGGGAAGAGGAAAAACAGCAAAAGAAGAGCTT
AATTAGAGCGCATGCACAAGTCATAAGAGCTGCACTGCTTTTTAGATTGGCCGGTGAACGTGAACTAGTGATAAGTCCAG
CAGCTACACCCTCACCTCAACATTCAGTTGGTGACTTTGGAGTTGGCCTAGAACAACTTGCTTCGATGTCTAAGGATCAA
AATATTTCTGCTTTACAGCAATATGGAGGGGTTAAAGGCCTATCAAGTTTACTAAAAGCAAGTCCAGATAAAGGAATTAG
TGGAGATGATGCTGATCTATTGAAAAGGAAAAATGCATTTGGAACTAATACATATCCTCGGAAAAAAGGGAGAAGTTTCT
GGAGGTTTTTATGGGAGGCTTGGCAAGATCTGACTCTCATAATATTGATTGTAGCAGCTGTAGTGTCATTGGTGCTTGGA
ATAAAAACAGAGGGTTGGAGTGACGGATGGTATGATGGGGGAAGCATTGCTTTTGCAGTTTTACTTGTTATTGTAGTTAC
TGCTGTCAGCGACTATCGACAATCTCTGCAATTTCAGAATTTGAATGCAGAGAAACAAAATATACAATTGGAGGTCATGA
GAAGTGGGAGAACGATTAAAATCTCCATATTTGATATTGTTGTTGGTGATGTTATACCCCTTAAAATAGGAGATCAGGTT
CCTGCTGATGGAGTATTAATCACAGGTCACTCACTTGAAATCGACGAATCCAGTATGACTGGTGAAAGCAAGATTGTTCA
TAAGGATCAGAAAGCACCCTTTTTTATGTCTGGTTGCAAAGTAGCAGATGGTGTTGGCGTTATGATGGTAACTGCTGTTG
GTATTAATACTGAGTGGGGATTATTGATGGCAAGTATCTCAGAGGACACAGGAGAAGAGACTCCATTACAGGTCCCCCCC
TGCTCCATCCTAATAAAAGAAAAGAAAGACTGTTGCTTTAGCAGTATAGTCGGGCTTTCTGTAGCTGTTTTAGTGCTTGC
AGTCCTCTTGGGAAGATACTTTTCTGGCCACACATATGATGCAAAAGGAAATCCCCAATTCGTTGCCGGAAAGACTGAAA
TTAGTATAGTAGTTGATGGGGTCATCAAAATTTTTACCATTGCAGTCACAATTGTAGTCGTTGCAGTGCCTGAAGGTCTA
CCTTTGGCTGTTACTTTAACCCTGGCATACTCGATGCGGAAAATGATGGCAGATAAAGCCTTGGTGCGAAGGCTGTCAGC
CTGTGAAACTATGGGCTCTGCTACAACAATTTGCAGTGATAAGACAGGAACATTGACGTTAAATCAGATGACTGTTGTTG
AAGCATATGTTGGGAAGAGCAAACTAAATCCACCAGATGACTCTTCAAAGTTCCATCCAGAAGCATTATCTCTGATAAAT
GAAAGCATTGCACAGAATACCACCGGAAATGTTTTTGTCTCTAAGGATGGTGGAGAGCTAGAGGTTTCAGGATCACCGAC
AGAGAAGGCAATTCTTTCATGGGCAGTCAAGTTGGGTATGAATTTTGATGTTATCAGATCTAACTCAACAGTTCTTCATG
TCTTTCCATTCAATTCCGAGAAAAAACGAGGCGGTGTTGCTCTGAAGCTGGTGGACTCTGGAGTGCATATACACTGGAAA
GGAGCTGCAGAAATAGTTCTAGGAGCATGTACCCAATATCTTGATTCAAATAGTCACCTGCAATCCATCGAACAAGAGAA
GGATTTTCTCAAGGAGGCTATTGATGACATGGCTGCTCGCAGTTTGCGTTGTGTTGCTATTGCATACAGATCGTATGAAT
TAGACAAAATTCCATCTAATGAGGAGGATTTAGCCCAATGGTCCTTACCAGAAGATGAGCTTGTTTTGCTTGCTATTGTT
GGAATCAAGGATCCTTGTCGCCCTGGTGTCAAAGATGCCGTGAGAATATGCACTGACGCTGGTGTTAAGGTACGCATGGT
TACTGGAGACAACCTTCAAACAGCAAAGGCAATAGCTCTGGAGTGTGGGATACTGGCTTCAAATGAAGAAGCAGTTGATC
CATGTATAATTGAAGGAAAGGTATTTCGGGAGCTATCTGAAAAAGAAAGGGAACAGGTTGCGAAGAAAATTACGGTGATG
GGCAGGTCTTCTCCTAATGACAAGCTTTTGCTCGTGCAAGCACTGCGTAAAGGAGGTGACGTGGTTGCTGTCACAGGAGA
TGGCACCAATGATGCCCCTGCACTACACGAGGCAGATATTGGTCTTTCTATGGGCATCCAAGGAACTGAAGTTGCAAAAG
AAAGCTCAGATATTATAATCTTGGATGATAACTTTGCATCAGTTGTAAAGGTTGTCCGCTGGGGCCGCTCTGTATATGCA
AATATTCAGAAATTTATCCAGTTCCAGCTTACTGTGAACGTTGCTGCTCTTGTAATAAATGTAGTGGCAGCAATAAGTTC
TGGTGATGTTCCTTTAAATGCAGTACAGCTTTTGTGGGTCAACCTTATCATGGACACACTTGGGGCCCTTGCCCTGGCTA
CGGAACCACCAACAGACCACCTAATGCACAGATCACCAGTTGGTCGAAGGGAACCTCTTATTACAAATATCATGTGGAGA
AACTTGATCGTACAGGCTCTTTATCAAGTTTCAGTTCTTCTCTTTCTGAACTTCTGCGGTGAAAGTATTCTACCTAAGCA
AGATACTAAAGCCCATGACTATCAAGTGAAGAATACTTTGATATTCAATGCATTCGTCATGTGCCAAATATTCAATGAGT
TCAATGCTCGGAAACCAGATGAAATGAATGTCTTCCCAGGAGTGACTAAGAACCGTCTCTTCATGGGAATTATTGGAATA
ACCTTTATACTTCAGATAGTCATCATTGAGTTCCTTGGAAAGTTTGCCTCAACGGTGAGGCTTGACTGGAAGTTGTGGCT
TGTTTCTCTTATAATTGGCCTTGTCAGCTGGCCTCTTGCTATAGCTGGAAAGTTCATTCCAGTTCCCAAAACACCATTGT
CACGTACGTTCATGAAGCCAATTAGACGATTGAGGAGGTCTCGTTCTTCGCAATAG
ATGGCTTCCAACGGCAACGGTAACGGCCATTTCTCCGTTACTATCGGCACCGGTCACAATGACGATGACGACGATAACAA
CAATCATCATCCTTCCGATAACAACAACCGCCGTAATGATAATGACAACAACGGCGACAACGATGAAGATGATGAACAAA
TTGATCCTGATGATCCTTTTGATATTGCTCAAACGAAGAATGCTTCTCATGAAACTCTTCGCCGTTGGAGACAAGCAGCA
CTGGTACTCAATGCGTCCAGGCGTTTTAGATATACTCTGGACTTCAAAGGGGAAGAGGAAAAACAGCAAAAGAAGAGCTT
AATTAGAGCGCATGCACAAGTCATAAGAGCTGCACTGCTTTTTAGATTGGCCGGTGAACGTGAACTAGTGATAAGTCCAG
CAGCTACACCCTCACCTCAACATTCAGTTGGTGACTTTGGAGTTGGCCTAGAACAACTTGCTTCGATGTCTAAGGATCAA
AATATTTCTGCTTTACAGCAATATGGAGGGGTTAAAGGCCTATCAAGTTTACTAAAAGCAAGTCCAGATAAAGGAATTAG
TGGAGATGATGCTGATCTATTGAAAAGGAAAAATGCATTTGGAACTAATACATATCCTCGGAAAAAAGGGAGAAGTTTCT
GGAGGTTTTTATGGGAGGCTTGGCAAGATCTGACTCTCATAATATTGATTGTAGCAGCTGTAGTGTCATTGGTGCTTGGA
ATAAAAACAGAGGGTTGGAGTGACGGATGGTATGATGGGGGAAGCATTGCTTTTGCAGTTTTACTTGTTATTGTAGTTAC
TGCTGTCAGCGACTATCGACAATCTCTGCAATTTCAGAATTTGAATGCAGAGAAACAAAATATACAATTGGAGGTCATGA
GAAGTGGGAGAACGATTAAAATCTCCATATTTGATATTGTTGTTGGTGATGTTATACCCCTTAAAATAGGAGATCAGGTT
CCTGCTGATGGAGTATTAATCACAGGTCACTCACTTGAAATCGACGAATCCAGTATGACTGGTGAAAGCAAGATTGTTCA
TAAGGATCAGAAAGCACCCTTTTTTATGTCTGGTTGCAAAGTAGCAGATGGTGTTGGCGTTATGATGGTAACTGCTGTTG
GTATTAATACTGAGTGGGGATTATTGATGGCAAGTATCTCAGAGGACACAGGAGAAGAGACTCCATTACAGGTCCCCCCC
TGCTCCATCCTAATAAAAGAAAAGAAAGACTGTTGCTTTAGCAGTATAGTCGGGCTTTCTGTAGCTGTTTTAGTGCTTGC
AGTCCTCTTGGGAAGATACTTTTCTGGCCACACATATGATGCAAAAGGAAATCCCCAATTCGTTGCCGGAAAGACTGAAA
TTAGTATAGTAGTTGATGGGGTCATCAAAATTTTTACCATTGCAGTCACAATTGTAGTCGTTGCAGTGCCTGAAGGTCTA
CCTTTGGCTGTTACTTTAACCCTGGCATACTCGATGCGGAAAATGATGGCAGATAAAGCCTTGGTGCGAAGGCTGTCAGC
CTGTGAAACTATGGGCTCTGCTACAACAATTTGCAGTGATAAGACAGGAACATTGACGTTAAATCAGATGACTGTTGTTG
AAGCATATGTTGGGAAGAGCAAACTAAATCCACCAGATGACTCTTCAAAGTTCCATCCAGAAGCATTATCTCTGATAAAT
GAAAGCATTGCACAGAATACCACCGGAAATGTTTTTGTCTCTAAGGATGGTGGAGAGCTAGAGGTTTCAGGATCACCGAC
AGAGAAGGCAATTCTTTCATGGGCAGTCAAGTTGGGTATGAATTTTGATGTTATCAGATCTAACTCAACAGTTCTTCATG
TCTTTCCATTCAATTCCGAGAAAAAACGAGGCGGTGTTGCTCTGAAGCTGGTGGACTCTGGAGTGCATATACACTGGAAA
GGAGCTGCAGAAATAGTTCTAGGAGCATGTACCCAATATCTTGATTCAAATAGTCACCTGCAATCCATCGAACAAGAGAA
GGATTTTCTCAAGGAGGCTATTGATGACATGGCTGCTCGCAGTTTGCGTTGTGTTGCTATTGCATACAGATCGTATGAAT
TAGACAAAATTCCATCTAATGAGGAGGATTTAGCCCAATGGTCCTTACCAGAAGATGAGCTTGTTTTGCTTGCTATTGTT
GGAATCAAGGATCCTTGTCGCCCTGGTGTCAAAGATGCCGTGAGAATATGCACTGACGCTGGTGTTAAGGTACGCATGGT
TACTGGAGACAACCTTCAAACAGCAAAGGCAATAGCTCTGGAGTGTGGGATACTGGCTTCAAATGAAGAAGCAGTTGATC
CATGTATAATTGAAGGAAAGGTATTTCGGGAGCTATCTGAAAAAGAAAGGGAACAGGTTGCGAAGAAAATTACGGTGATG
GGCAGGTCTTCTCCTAATGACAAGCTTTTGCTCGTGCAAGCACTGCGTAAAGGAGGTGACGTGGTTGCTGTCACAGGAGA
TGGCACCAATGATGCCCCTGCACTACACGAGGCAGATATTGGTCTTTCTATGGGCATCCAAGGAACTGAAGTTGCAAAAG
AAAGCTCAGATATTATAATCTTGGATGATAACTTTGCATCAGTTGTAAAGGTTGTCCGCTGGGGCCGCTCTGTATATGCA
AATATTCAGAAATTTATCCAGTTCCAGCTTACTGTGAACGTTGCTGCTCTTGTAATAAATGTAGTGGCAGCAATAAGTTC
TGGTGATGTTCCTTTAAATGCAGTACAGCTTTTGTGGGTCAACCTTATCATGGACACACTTGGGGCCCTTGCCCTGGCTA
CGGAACCACCAACAGACCACCTAATGCACAGATCACCAGTTGGTCGAAGGGAACCTCTTATTACAAATATCATGTGGAGA
AACTTGATCGTACAGGCTCTTTATCAAGTTTCAGTTCTTCTCTTTCTGAACTTCTGCGGTGAAAGTATTCTACCTAAGCA
AGATACTAAAGCCCATGACTATCAAGTGAAGAATACTTTGATATTCAATGCATTCGTCATGTGCCAAATATTCAATGAGT
TCAATGCTCGGAAACCAGATGAAATGAATGTCTTCCCAGGAGTGACTAAGAACCGTCTCTTCATGGGAATTATTGGAATA
ACCTTTATACTTCAGATAGTCATCATTGAGTTCCTTGGAAAGTTTGCCTCAACGGTGAGGCTTGACTGGAAGTTGTGGCT
TGTTTCTCTTATAATTGGCCTTGTCAGCTGGCCTCTTGCTATAGCTGGAAAGTTCATTCCAGTTCCCAAAACACCATTGT
CACGTACGTTCATGAAGCCAATTAGACGATTGAGGAGGTCTCGTTCTTCGCAATAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Oryza sativa indica | BGIOSGA014399 | ortholog_many2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mtru_45 | 58.18 | 75.54 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all MTR_4g008170 retrocopies