Parental gene: | PGSC0003DMG400021536 |
| Aliases: | None |
| Description: | Heat shock protein 70 (HSP70)-interacting protein [Source:PGSC_GENE;Acc:PGSC0003DMG400021536] |
| Organism: | Potato (Solanum tuberosum) |
| Coordinates: | 4:67328913..67331416(-) |
>PGSC0003DMG400021536
ATGCATTTGATTGATGAAGATCAAGAACTTGTGCTAGTGTTAAGTGGCCTTTGGACCATGGCAATGTCTCAACCAAATGA
CAAAGAGCTTCCATCTTTAGGCATTTTTGAATGCATGGCAAGTTTAATCAACAAAGGTATAAATCAAAAATCTTGGCTTC
AAAAAAATCAAAATATTTATATTCCTTATTATGCTTCTCATATTATTGGTTCTTATACAATGAACAATGTTGAGTTTGCT
ATTAAAGCATTGGATTGTGGTGTTTTAGTCCCATTATTGGATCTTTTAAGAGGAAAAATGACTTGGGTTGAACAAAGAGT
GGCTATTAGAGCAATTGGTCACTTAGCAAGTTATGAAAAGACATTCAAAAGTGTAGCAATTTATGAAGAAGAAATTGTGA
AATTAGCCATGAATTTGGCTTCAACATGTCTTGAAGTTGTGTACAAAGAGTTTGTTGGTGTGAAGGATTTGACTATGAGA
TTGAAATATCATTGTGATTTGTTGACTAGAGGAGTTGGAGGACTAGAAATGGAAAATAGTAAAGCTGAAGAATGGGCTAG
TCAACTTCAATGTTGGAGTTTACATCTTTTAAATTGCTTTGCAATTAAGGAAAGGTGTTTAAATCTCATTTGTGAGCAAA
TTTTTTTGAAGGAGTTAAGTGAAATGTGGGGTGGATTGGCTAATGATTCTTCACCAGGAGGGGTTGGATTAATTAGAGTT
TTGTGTTATAATAAAGATGGAAGAAGATGTATAGCTGAATCAAAGGATGTAATCAAGAATCTTTGTAATCTTGCAAGATC
TTCAGATGATTGGCAATATATGGGAATAGATTGTCTACTTCTACTTCTTGCCGATTCAGGTACAAGGTACAAAGTTCTTA
AAGTGGCTTCCATGTGTCTTGTTGATTTAATTGAACTTAGGACTCTTGGAGGTAGATCAAATGTTGGTAATACAATCACA
AGAACTCTTCTTGCAGATTTCAAACAAAGAAAGGTGAAAATCAAGAATATCGGTGTTCAACAAGTGCTTGAAGAAATATG
GGGTTTGAAAGTAGATAGGAAGAAAAGGGAGCAAAATATGAGTGATGAGAAACTTGAAGAGAAAAGGGTAATGGTGAGTT
TGATGAAACAAGAAGGGAACAATAGTTTTTGGTTAGGGAAAATTGAAGAAGCAATGATGAAATATAGTGAGGCTTTGGAG
TTATGTCCATTAAGATTTAGAAAAGAAAGAATTGTGCTTTATAGCAATAGAGCACAATGTAAATTGTTATTAGGAGAGGC
TAATGATGCAATTAGTGATACAACTAAAGCTTTATCACTTTCATCTCCAACTAATTCACATTCCAAAAGCCTTTGGAGAA
GATCACAAGCATATGATATGAAAGGATTAGCTAAAGAGAGCTTGGTGGATTGTATTATGTTTGTTAATTGTTGCTTTAAA
ATGGATTATTCTTCATCATCATCATCATCATCAACAATGAAGAAAAATATGAGAATCCCTTATTATGCTGTTAGAATGAT
CAACAAACAAATGGAGTCAACTTGGTTATTTAAAAATGCTCAATTGAAGACTTTTGTTGATCTTAGTGAAAAAACAAATC
AACCACATGATGTCATGAGAGCTACAAGAATTCTATTGCAAAAGAAGGGTTTCATTGAAGGACTTTCCAGTATATCAGAA
GAACCTCAGTTGATTGAAAAGGGTGAAATTAGTAGGAAAAATCTGGTAATTAAGGACAGGGAAAGACAGAAAAATGTATT
CACTCAGTCAGTGTAG
ATGCATTTGATTGATGAAGATCAAGAACTTGTGCTAGTGTTAAGTGGCCTTTGGACCATGGCAATGTCTCAACCAAATGA
CAAAGAGCTTCCATCTTTAGGCATTTTTGAATGCATGGCAAGTTTAATCAACAAAGGTATAAATCAAAAATCTTGGCTTC
AAAAAAATCAAAATATTTATATTCCTTATTATGCTTCTCATATTATTGGTTCTTATACAATGAACAATGTTGAGTTTGCT
ATTAAAGCATTGGATTGTGGTGTTTTAGTCCCATTATTGGATCTTTTAAGAGGAAAAATGACTTGGGTTGAACAAAGAGT
GGCTATTAGAGCAATTGGTCACTTAGCAAGTTATGAAAAGACATTCAAAAGTGTAGCAATTTATGAAGAAGAAATTGTGA
AATTAGCCATGAATTTGGCTTCAACATGTCTTGAAGTTGTGTACAAAGAGTTTGTTGGTGTGAAGGATTTGACTATGAGA
TTGAAATATCATTGTGATTTGTTGACTAGAGGAGTTGGAGGACTAGAAATGGAAAATAGTAAAGCTGAAGAATGGGCTAG
TCAACTTCAATGTTGGAGTTTACATCTTTTAAATTGCTTTGCAATTAAGGAAAGGTGTTTAAATCTCATTTGTGAGCAAA
TTTTTTTGAAGGAGTTAAGTGAAATGTGGGGTGGATTGGCTAATGATTCTTCACCAGGAGGGGTTGGATTAATTAGAGTT
TTGTGTTATAATAAAGATGGAAGAAGATGTATAGCTGAATCAAAGGATGTAATCAAGAATCTTTGTAATCTTGCAAGATC
TTCAGATGATTGGCAATATATGGGAATAGATTGTCTACTTCTACTTCTTGCCGATTCAGGTACAAGGTACAAAGTTCTTA
AAGTGGCTTCCATGTGTCTTGTTGATTTAATTGAACTTAGGACTCTTGGAGGTAGATCAAATGTTGGTAATACAATCACA
AGAACTCTTCTTGCAGATTTCAAACAAAGAAAGGTGAAAATCAAGAATATCGGTGTTCAACAAGTGCTTGAAGAAATATG
GGGTTTGAAAGTAGATAGGAAGAAAAGGGAGCAAAATATGAGTGATGAGAAACTTGAAGAGAAAAGGGTAATGGTGAGTT
TGATGAAACAAGAAGGGAACAATAGTTTTTGGTTAGGGAAAATTGAAGAAGCAATGATGAAATATAGTGAGGCTTTGGAG
TTATGTCCATTAAGATTTAGAAAAGAAAGAATTGTGCTTTATAGCAATAGAGCACAATGTAAATTGTTATTAGGAGAGGC
TAATGATGCAATTAGTGATACAACTAAAGCTTTATCACTTTCATCTCCAACTAATTCACATTCCAAAAGCCTTTGGAGAA
GATCACAAGCATATGATATGAAAGGATTAGCTAAAGAGAGCTTGGTGGATTGTATTATGTTTGTTAATTGTTGCTTTAAA
ATGGATTATTCTTCATCATCATCATCATCATCAACAATGAAGAAAAATATGAGAATCCCTTATTATGCTGTTAGAATGAT
CAACAAACAAATGGAGTCAACTTGGTTATTTAAAAATGCTCAATTGAAGACTTTTGTTGATCTTAGTGAAAAAACAAATC
AACCACATGATGTCATGAGAGCTACAAGAATTCTATTGCAAAAGAAGGGTTTCATTGAAGGACTTTCCAGTATATCAGAA
GAACCTCAGTTGATTGAAAAGGGTGAAATTAGTAGGAAAAATCTGGTAATTAAGGACAGGGAAAGACAGAAAAATGTATT
CACTCAGTCAGTGTAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Solanum lycopersicum | Solyc04g078170.1 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_stub_101 | 54.79 | 82.57 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all PGSC0003DMG400021536 retrocopies