Parental gene: | TCM_041518 |
| Aliases: | None |
| Description: | Zinc finger C-x8-C-x5-C-x3-H type family protein isoform 1 |
| Organism: | Cacao (Theobroma cacao) |
| Coordinates: | 9:38121522..38126029(-) |
>TCM_041518
ATGGCGGAGCACTTGGCATCGATATTTGGTACGGAAAAGGATAGGGTCAACTGCCCGTTCTATTTCAAGATAGGCGCTTG
TCGTCACGGAGACCGGTGCTCGCGTCTCCACACCAAGCCCAGCATCAGCCCGACTCTCCTTCTCTCAAACATGTACCAGC
GGCCCGACATGATCACCCCCGGCGTCGAAAACCAGGGTAACCCCATCGACCCCCGCAAGATCCAAGAACATTTCGAGGAG
TTTTATGAGGATTTATTTGAGGAACTGAGCAAGTACGGTGAAATTGAGAGTCTGAATATATGCGACAACTTGGCTGACCA
TATGGTGGGCAATGTGTATGTTCAGTTTAGAGAAGAAGAACATGCCGCAAATGCGCTCAGGAATCTTAGTGGAAGATATT
ATTCTGGCCGTCCTATCATTGTTGACTTCTCACCTGTGACTGACTTCCGTGAAGCCACCTGTAGGCAGTATGAAGAGAAC
ACTTGCAATCGTGGTGGATATTGCAATTTCATGCACCTGAAAACAATCAGCAGGGAGTTGAGGCGCCAGTTATTTGGGAG
GTATAGAAGGAGGCGAAGCCATAGCCAAAGCAGAAGCAGAAGCCCTCCAAAGCATCGTGGTAGCCATGAGGAACGCTCTC
ATGGTGGGCGTGGCCACATTAGACGGTATGGTGATAGAGATCATTATCATGAAAGCCGGAGTAAAAGGCATAGAAGCACT
AGTCCTGGCCATAGGAGAGGACGGAGCAGAAGCCCTGGGGGAAAGAGAAATCGTAGTCCAGTTCGTGAAGGCAGTGAGGA
GAGGCGTGCGAAAATTGAGCAATGGAACCGTGAAAGGGAGCAAGAAAATGCTAACAGAGTTGATAATGATGCTGCCAATA
ATAACAATGAGAATGGTAACAATGGATATGCAAAGAATGATGATAAGTACTATGGACATCAGCAGCAGCAGGAGTAG
ATGGCGGAGCACTTGGCATCGATATTTGGTACGGAAAAGGATAGGGTCAACTGCCCGTTCTATTTCAAGATAGGCGCTTG
TCGTCACGGAGACCGGTGCTCGCGTCTCCACACCAAGCCCAGCATCAGCCCGACTCTCCTTCTCTCAAACATGTACCAGC
GGCCCGACATGATCACCCCCGGCGTCGAAAACCAGGGTAACCCCATCGACCCCCGCAAGATCCAAGAACATTTCGAGGAG
TTTTATGAGGATTTATTTGAGGAACTGAGCAAGTACGGTGAAATTGAGAGTCTGAATATATGCGACAACTTGGCTGACCA
TATGGTGGGCAATGTGTATGTTCAGTTTAGAGAAGAAGAACATGCCGCAAATGCGCTCAGGAATCTTAGTGGAAGATATT
ATTCTGGCCGTCCTATCATTGTTGACTTCTCACCTGTGACTGACTTCCGTGAAGCCACCTGTAGGCAGTATGAAGAGAAC
ACTTGCAATCGTGGTGGATATTGCAATTTCATGCACCTGAAAACAATCAGCAGGGAGTTGAGGCGCCAGTTATTTGGGAG
GTATAGAAGGAGGCGAAGCCATAGCCAAAGCAGAAGCAGAAGCCCTCCAAAGCATCGTGGTAGCCATGAGGAACGCTCTC
ATGGTGGGCGTGGCCACATTAGACGGTATGGTGATAGAGATCATTATCATGAAAGCCGGAGTAAAAGGCATAGAAGCACT
AGTCCTGGCCATAGGAGAGGACGGAGCAGAAGCCCTGGGGGAAAGAGAAATCGTAGTCCAGTTCGTGAAGGCAGTGAGGA
GAGGCGTGCGAAAATTGAGCAATGGAACCGTGAAAGGGAGCAAGAAAATGCTAACAGAGTTGATAATGATGCTGCCAATA
ATAACAATGAGAATGGTAACAATGGATATGCAAAGAATGATGATAAGTACTATGGACATCAGCAGCAGCAGGAGTAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Amborella trichopoda | AMTR_s00040p00218420 | ortholog_one2many | 1 retrogene | |
| Vitis vinifera | VIT_08s0007g03950 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_tcac_16 | 72.44 | 88.68 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all TCM_041518 retrocopies