Parental gene: | scaffold_200850.1 |
| Aliases: | None |
| Description: | Glycosyl hydrolase family 17 protein [Source:UniProtKB/TrEMBL;Acc:D7KYQ4] |
| Organism: | Lyre-leaved rock-cress (Arabidopsis lyrata) |
| Coordinates: | 2:7263747..7265774(-) |
>scaffold_200850.1
ATGTCAAATCTGTTAGCCATCGTCGTCGGATTCGTAATCGTAATTGGTTATTTGGGTATTTTGGTAAATGGGTTGGGTGT
GAATTGGGGAACAATGGCTACACATAAGCTGCCTCCAAAGACAGTGGTTCAGATGCTTAAGGACAATAACATCAACAAGG
TGAAGCTTTTTGACGCAGACGAGACAACCATGGGTGCACTCGCTGGCTCGGGTCTTGAAGTGATGGTCGCTATTCCAAAT
GATCAGCTTAAGGTTATGACCAGTTACGACCGGGCCAAAGATTGGGTTCGTAAGAATGTCACTCGTTATAACTTCGATGG
TGGTGTCAATATCACGTTTGTAGCTGTTGGAAATGAGCCATTCCTCAAATCATACAATGGATCGTTCATTAACCTCACAT
TTCCTGCACTTACGAACATTCAAAACGCTCTAAATGAAGCTGGACTAGGAAACTCAGTCAAAGCAACCGTCCCTTTAAAC
GCGGATGTATACGATTCACCAGCAAGCAACCCTGTTCCATCTGCAGGAAGATTCCGTCCCGATATCATTGGTCAAATGAC
TCAAATTGTTGACTTTCTTGGCAAGAACAATGCTCCCATCACAATTAATATCTACCCTTTCTTAAGTCTCTATGGGAATG
ATGATTTCCCACTCAATTATGCCTTCTTCGATGGGGCTCAACCGATAAATGACAACGGTATTGATTACACAAATGTTTTT
GATGCCAATTTCGACACTTTGGTGTCGTCTTTGAAAGCTGTTGGTCATGGCGATATGCCAATAATCGTTGGAGAAGTCGG
TTGGCCAACAGAGGGTGACAAACACGCGAATTCCGGCAATGCTTACAGATTCTACAACGGGCTTTTACCAAGGCTTGGAA
CAAACAAAGGCACTCCATTGAGACCAACCTACATTGAGGTATACTTGTTCGGATTACTCGATGAGGATGCGAAAAGTATA
GCACCGGGACCGTTTGAACGCCATTGGGGAATATTTAAATTCGACGGGCAACCAAAGTTTCCTATAGATCTGTCAGGTCA
AGGACAGAACAAGTTGTTGATTGGTGCACAAAACGTGCCGTATCTACCCAACAAGTGGTGTACGTTTAATCCAGAAGCCA
AAGATTTGACAAAACTGGCGGCTAACATAGATTTCGCCTGCACTTTCTCGGATTGCACAGCGCTTGGTTATGGATCTTCC
TGCAATACACTTGATGCCAATGGGAATGCGTCGTATGCGTTTAACATGTACTTTCAAGTGAAGAATCAAGATGAAAGTGC
TTGTTTCTTCCAAGGGTTGGCCACCATTACCACACAGAATATATCTCAAGGACAATGCAATTTCCCTATTCAGATTGTGG
CTTCCTCAGCCTCTTCCTTTTCTTGTTCGTCTTATTCTTTGGTTTTGTTGATCCTTTGGTTTCTCTTGTCAGGTTAG
ATGTCAAATCTGTTAGCCATCGTCGTCGGATTCGTAATCGTAATTGGTTATTTGGGTATTTTGGTAAATGGGTTGGGTGT
GAATTGGGGAACAATGGCTACACATAAGCTGCCTCCAAAGACAGTGGTTCAGATGCTTAAGGACAATAACATCAACAAGG
TGAAGCTTTTTGACGCAGACGAGACAACCATGGGTGCACTCGCTGGCTCGGGTCTTGAAGTGATGGTCGCTATTCCAAAT
GATCAGCTTAAGGTTATGACCAGTTACGACCGGGCCAAAGATTGGGTTCGTAAGAATGTCACTCGTTATAACTTCGATGG
TGGTGTCAATATCACGTTTGTAGCTGTTGGAAATGAGCCATTCCTCAAATCATACAATGGATCGTTCATTAACCTCACAT
TTCCTGCACTTACGAACATTCAAAACGCTCTAAATGAAGCTGGACTAGGAAACTCAGTCAAAGCAACCGTCCCTTTAAAC
GCGGATGTATACGATTCACCAGCAAGCAACCCTGTTCCATCTGCAGGAAGATTCCGTCCCGATATCATTGGTCAAATGAC
TCAAATTGTTGACTTTCTTGGCAAGAACAATGCTCCCATCACAATTAATATCTACCCTTTCTTAAGTCTCTATGGGAATG
ATGATTTCCCACTCAATTATGCCTTCTTCGATGGGGCTCAACCGATAAATGACAACGGTATTGATTACACAAATGTTTTT
GATGCCAATTTCGACACTTTGGTGTCGTCTTTGAAAGCTGTTGGTCATGGCGATATGCCAATAATCGTTGGAGAAGTCGG
TTGGCCAACAGAGGGTGACAAACACGCGAATTCCGGCAATGCTTACAGATTCTACAACGGGCTTTTACCAAGGCTTGGAA
CAAACAAAGGCACTCCATTGAGACCAACCTACATTGAGGTATACTTGTTCGGATTACTCGATGAGGATGCGAAAAGTATA
GCACCGGGACCGTTTGAACGCCATTGGGGAATATTTAAATTCGACGGGCAACCAAAGTTTCCTATAGATCTGTCAGGTCA
AGGACAGAACAAGTTGTTGATTGGTGCACAAAACGTGCCGTATCTACCCAACAAGTGGTGTACGTTTAATCCAGAAGCCA
AAGATTTGACAAAACTGGCGGCTAACATAGATTTCGCCTGCACTTTCTCGGATTGCACAGCGCTTGGTTATGGATCTTCC
TGCAATACACTTGATGCCAATGGGAATGCGTCGTATGCGTTTAACATGTACTTTCAAGTGAAGAATCAAGATGAAAGTGC
TTGTTTCTTCCAAGGGTTGGCCACCATTACCACACAGAATATATCTCAAGGACAATGCAATTTCCCTATTCAGATTGTGG
CTTCCTCAGCCTCTTCCTTTTCTTGTTCGTCTTATTCTTTGGTTTTGTTGATCCTTTGGTTTCTCTTGTCAGGTTAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Brassica rapa | Bra036718 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_alyr_28 | 55.19 | 88.08 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all scaffold_200850.1 retrocopies