RetrogeneDB ID: | retro_amel_1707 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL194038.1:141943..142275(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | FAM96A | ||
Ensembl ID: | ENSAMEG00000002448 | ||
Aliases: | None | ||
Description: | family with sequence similarity 96, member A [Source:HGNC Symbol;Acc:26235] |
Percent Identity: | 67.24 % |
Parental protein coverage: | 70.19 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 3 |
Parental | DPEKPNT-LEELEVVTESSVEVQEINEEDCLVVIRFTPTVPHCSLATLIAGLCLRVK-LQRCLPFKHKLE |
DPEKPNT.LEELEVV..SS..VQE......LV.IRF.PTVPHC..ATL..GLCLRVK.L...LPFK.KLE | |
Retrocopy | DPEKPNT<LEELEVVMVSSMDVQE-RKDSYLVAIRFRPTVPHCCSATL-SGLCLRVK>LSVFLPFKGKLE |
Parental | IYISEGTHSTEEDINKQINDKERVA-AAMENPNLREIVEQCVLEPD |
I.ISEGTHS.EED.N..INDKE.VA..AMEN..L.EI...C.LEP. | |
Retrocopy | ICISEGTHSAEEDNNRKINDKEQVA<TAMENTTLQEILY*CILEPN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |