RetrogeneDB ID: | retro_amel_439 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL192442.1:171951..172152(-) | ||
Located in intron of: | ENSAMEG00000009034 | ||
Retrocopyinformation | Ensembl ID: | ENSAMEG00000009138 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | HMGN1 | ||
Ensembl ID: | ENSAMEG00000014100 | ||
Aliases: | None | ||
Description: | high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:4984] |
Percent Identity: | 85.29 % |
Parental protein coverage: | 70.1 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | QVSSAEGAAKEEPKRRSARLSAKPAPAKVETKPKKAAGKDKSSDKKVQTKGKRGAKGKQAEVANQGTK |
.VSS.EG.AKEE.KRRS.RLSAKPAP.KVE.KPKKAAGKDKSSDKKVQT.GKRGAKGKQAEVANQ..K | |
Retrocopy | KVSSTEGVAKEELKRRSSRLSAKPAPIKVEMKPKKAAGKDKSSDKKVQT-GKRGAKGKQAEVANQEMK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |