RetrogeneDB ID: | retro_etel_1522 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_27685:2..466(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | BCAP31 | ||
Ensembl ID: | ENSETEG00000008662 | ||
Aliases: | None | ||
Description: | B-cell receptor-associated protein 31 [Source:HGNC Symbol;Acc:16695] |
Percent Identity: | 83.02 % |
Parental protein coverage: | 66.67 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 3 |
Parental | MSLQWTAVATFLYAEVFVVLL-LCIPFIPPKRWQKIFKSRLVELVVTYGNTFFVVLIVILVLLLVDAGRE |
MSLQW.A.ATFLYAEVF.V.L.L.I..IP.KRWQ.IFKSRLVELVVTYGNTFFV.LIVIL.LLLVDAGRE | |
Retrocopy | MSLQWPAEATFLYAEVF-VVL>LGIACIPAKRWQQIFKSRLVELVVTYGNTFFVALIVILILLLVDAGRE |
Parental | IWKYDDVTEKVNLQNNPGAMEHFHMKLFRAQRNLYIAGFALLLSFL-LRRLVTLISQQATLLASNEAIKK |
IWK.DD.TEKV.LQ.NPGA.EHFHMKL.RAQRNL.IAGFALLLSFL.LRRLVTLISQQATLLAS.EA.KK | |
Retrocopy | IWKNDDITEKVSLQHNPGAPEHFHMKLLRAQRNLSIAGFALLLSFL<LRRLVTLISQQATLLASSEAFKK |
Parental | Q-AESASEAAKKYMEENEQ |
Q.A.SASEA.K.YMEE.EQ | |
Retrocopy | Q<AGSASEAPKRYMEEDEQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Canis familiaris | ENSCAFG00000019245 | 1 retrocopy | |
Callithrix jacchus | ENSCJAG00000011348 | 1 retrocopy | |
Echinops telfairi | ENSETEG00000008025 | 1 retrocopy | |
Echinops telfairi | ENSETEG00000008662 | 1 retrocopy |
retro_etel_1522 ,
|
Macropus eugenii | ENSMEUG00000007345 | 3 retrocopies | |
Monodelphis domestica | ENSMODG00000008300 | 2 retrocopies | |
Sarcophilus harrisii | ENSSHAG00000009111 | 1 retrocopy |