RetrogeneDB ID: | retro_meug_208 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | GeneScaffold_6165:52170..52648(-) | ||
Located in intron of: | ENSMEUG00000009149 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | BCAP31 | ||
Ensembl ID: | ENSMEUG00000007345 | ||
Aliases: | None | ||
Description: | B-cell receptor-associated protein 31 [Source:HGNC Symbol;Acc:16695] |
Percent Identity: | 78.31 % |
Parental protein coverage: | 67.49 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | LLLIDAVREIRKYDDVTEKVNLQNNPGAMEHFHMKLFRAQRNLHIAGFSLLLSFLLRRLVTLISQQATLL |
.LL.DAV....KY.DVTEKVNL.NNPGA.EHFHMKLFRAQRNLHIAGFSLLL.FL.RRLVTL.SQQ.TLL | |
Retrocopy | VLLTDAV----KYGDVTEKVNL*NNPGAVEHFHMKLFRAQRNLHIAGFSLLLPFLFRRLVTLFSQQVTLL |
Parental | ASNEAFKKQAEGASEAAKKYIEENDKLKKEAGTNGGKLDLNDDVLAENKNLKAELKKLTEELDISKRNL- |
ASNE.F.KQAEGA..AAKKYIEEN.KLK...GTN..KLDLND.VLAENKNLK.ELKKL.EEL.ISK..L. | |
Retrocopy | ASNETFIKQAEGAGKAAKKYIEENGKLKEKTGTNSSKLDLNDGVLAENKNLKTELKKLMEELAISKCSL< |
Parental | ERAENEALAMRKQS-KGLTKEYDRLL |
ERAENEALAM..QS.KGL.KEY..LL | |
Retrocopy | ERAENEALAMLEQS<KGLPKEYYCLL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Canis familiaris | ENSCAFG00000019245 | 1 retrocopy | |
Callithrix jacchus | ENSCJAG00000011348 | 1 retrocopy | |
Echinops telfairi | ENSETEG00000008662 | 1 retrocopy | |
Macropus eugenii | ENSMEUG00000007345 | 3 retrocopies |
retro_meug_1017, retro_meug_1867, retro_meug_208 ,
|
Monodelphis domestica | ENSMODG00000008300 | 2 retrocopies | |
Sarcophilus harrisii | ENSSHAG00000009111 | 1 retrocopy |