RetrogeneDB ID: | retro_etel_1619 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_283483:9907..10230(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | GTSF1 | ||
Ensembl ID: | ENSETEG00000009310 | ||
Aliases: | None | ||
Description: | gametocyte specific factor 1 [Source:HGNC Symbol;Acc:26565] |
Percent Identity: | 91.74 % |
Parental protein coverage: | 65.06 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | EETYIDSLDPEKLLQCPYDKNHQIRACRFP-YHLIKCRKNHPDVANKLATCPFNARHQVPRAEISHHIAS |
EETYI.SLDPEKLLQCPYDKNHQIRAC.F..YHLIKCRKNHPDVANKLATCPF.ARHQVPRAEISHHI.S | |
Retrocopy | EETYINSLDPEKLLQCPYDKNHQIRACKFS<YHLIKCRKNHPDVANKLATCPFKARHQVPRAEISHHILS |
Parental | CDDKSCIEQDVVNQTRNLGQETLAESTWQCPPCDEDWDK |
CDDKSCIEQDVVNQTRNLGQETLAE.TWQ.PPC.EDWDK | |
Retrocopy | CDDKSCIEQDVVNQTRNLGQETLAERTWQWPPCEEDWDK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |