RetrogeneDB ID: | retro_etel_699 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_146923:477..786(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | DYNLRB1 | ||
Ensembl ID: | ENSETEG00000018637 | ||
Aliases: | None | ||
Description: | dynein, light chain, roadblock-type 1 [Source:HGNC Symbol;Acc:15468] |
Percent Identity: | 63.81 % |
Parental protein coverage: | 87.83 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 3 |
Parental | PGSSVWVRPC-VPCIPFSL-PQPAEVEETLKRLQSQKGVQGIIVV-NTEGIPIKSTMDNPTTTQYANLMH |
PGS...V..C.V...PFSL.P.P..........Q.QKGVQGI.VV.NTEG.P.KST.DN.TTTQY.N.MH | |
Retrocopy | PGSLRCVSSC*VLSVPFSL>PSPVRQRPKKPLEQPQKGVQGITVV>NTEGSPVKSTTDNRTTTQYTNCMH |
Parental | SFILKARSTVR-EIDPQNDLTFLRIRSKKNEIMVA |
.FI.K.RSTVR.E.DPQNDL.FLRI.SKKNEIM.A | |
Retrocopy | TFISKGRSTVR>ETDPQNDLPFLRIHSKKNEIMIA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |