RetrogeneDB ID: | retro_itri_1592 | ||
Retrocopylocation | Organism: | Squirrel (Ictidomys tridecemlineatus) | |
Coordinates: | JH393561.1:1705599..1705987(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSSTOG00000025410 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 80.3 % |
Parental protein coverage: | 63.41 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | INSIL-YQRGIYPSETFTRVQKYGLTLLVTTDPELIKYLSSVVEQLKDWLYKCSVQKLVVVISNIESGEV |
INSIL....GIYPS.TFT.VQKYGLTLLVTTD.ELIKYL.SVV.QLKD.LYKCS.QKLVVVIS.....E. | |
Retrocopy | INSIL<VTCGIYPSKTFT*VQKYGLTLLVTTDTELIKYLNSVVDQLKDCLYKCSFQKLVVVISKNKNREL |
Parental | LERWQFDIECDKTAKDDSAPREKSQKAIQDEIRSVIRQIT-ATVTFLPLLEVSCSFDLLIYT |
L.RWQFDIECDKTAKDDSAPREKSQKAIQD.I.SVI.QI...TVTFLP.LE.SCSFDLLIYT | |
Retrocopy | LKRWQFDIECDKTAKDDSAPREKSQKAIQDKIHSVISQIM<GTVTFLPRLEISCSFDLLIYT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |