RetrogeneDB ID: | retro_meug_1364 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold38185:7006..7783(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSMEUG00000004764 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | DDI2 | ||
Ensembl ID: | ENSMEUG00000006148 | ||
Aliases: | None | ||
Description: | DNA-damage inducible 1 homolog 2 (S. cerevisiae) [Source:HGNC Symbol;Acc:24578] |
Percent Identity: | 75.29 % |
Parental protein coverage: | 66.25 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MLLTVYCVRRDLSEVTFSLQVDADFELHNFRALCELESGIPAAESQIVYAERPLTDNHRSLASYGLKDGD |
M.LTV.CVRRD..EVTFS.QVD.DFEL..FR.LCE.ESGIPA.E.QIV.AE..L.DNHRSLASYGL.DGD | |
Retrocopy | MQLTVFCVRRDSTEVTFSIQVDRDFELYTFRVLCEAESGIPAEEAQIVFAENRLEDNHRSLASYGLRDGD |
Parental | VVILRQKENAEPRAPVQFPSLPRIDFSSIAVPGTSGSRLHPPTQPSRVSPADTASSPQGLDNPALLRDML |
VV.LRQ....EP..P..F.....IDFSSIAVPG.S.S...PP.QPS...P...AS.PQ..DNPA.LRDML | |
Retrocopy | VVVLRQARHEEPGSPGDFTG---IDFSSIAVPGLSASQCQPPAQPSQSFPG-MASAPQVTDNPAVLRDML |
Parental | LANPHELSLLKERNPPLAEALLSGDLEKFTRVLIEQQQDRARREQERIRLFAADPFDLEAQAKIEEDIRQ |
L.NP.EL.LLKERNP.LA.ALLSGDLE.FTRVLIEQQ.D.A.R..ER..LF.ADPF.LEAQAKIEE.IRQ | |
Retrocopy | LSNPQELCLLKERNPSLAKALLSGDLEEFTRVLIEQQEDQALRDEERFHLFVADPFNLEAQAKIEEAIRQ |
Parental | QNIEENMTIAMEEAPESFGQVVMLYINCKVNGHPVKAFVDSGAQMTIMSQACA |
QNIEENM.IAMEEAPESFGQVVMLYINCKVNGHPVKAFVD.GAQMTIMSQACA | |
Retrocopy | QNIEENMSIAMEEAPESFGQVVMLYINCKVNGHPVKAFVDTGAQMTIMSQACA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |