Parental gene:

DDI2, ENSPPYG00000001841

Aliases:None
Description:DNA-damage inducible 1 homolog 2 (S. cerevisiae) [Source:HGNC Symbol;Acc:24578]
Organism:Orangutan (Pongo abelii)
Coordinates:1:214804851..214848138(-)


>ENSPPYG00000001841
ATGCTGCTCACCGTGTACTGTGTGCGGAGGGACCTCTCCGAGGTGACCTTTTCCCTCCAGGTCGACGCCGACTTCGAGCT
GCACAACTTCCGCGCGCTGTGCGAGCTCGAGTCTGGCATCCCCGCAGCCGAGAGCCAGATCGTCTATGCTGAAAGACCTC
TCACAGACAACCACAGATCATTGGCTTCTTATGGCTTGAAAGATGGGGACGTTGTGATTTTACGACAGAAGGAGAATGCA
GACCCTCGACCTCCAGTGCAGTTCCCAAACTTACCCCGAATAGATTTCAGTAGTATAGCTGTGCCTGGCACATCAAGTCC
CCGGCAGCGCCAGCCACCAGGAACACAGCAGTCCCACTCATCTCCTGGAGAAATAACTTCATCTCCTCAGGGCTTGGACA
ATCCAGCCTTGCTCCGAGATATGTTGCTGGCCAACCCCCATGAGCTGTCCTTGCTGAAGGAACGCAATCCACCCCTGGCA
GAAGCTCTGCTCAGTGGAGACCTTGAGAAATTTTCTAGAGTCCTGGTGGAGCAGCAGCAGGACCGAGCCCGGAGAGAGCA
AGAAAGGATTCGTCTGTTTTCTGCTGATCCCTTTGACCTTGAAGCTCAGGCAAAGATAGAAGAAGATATAAGGCAACAGA
ACATTGAGGAAAACATGACAATAGCTATGGAAGAGGCTCCGGAAAGTTTTGGCCAAGTAGTGATGCTTTATATTAACTGC
AAAGTGAATGGACATCCTGTGAAAGCCTTTGTTGACTCAGGTGCCCAGATGACTATTATGAGCCAAGCTTGTGCAGAAAG
GTGTAATATAATGAGACTGGTGGACCGTCGGTGGGCAGGGATTGCCAAAGGAGTGGGCACCCAGAAGATTATTGGAAGGG
TACATCTAGCTCAGGTTCAGATTGAAGGAGATTTTTTGCCATGTTCCTTCTCTATACTTGAGGAACAGCCCATGGACATG
CTTCTGGGACTGGACATGCTTAAACGGCACCAGTGTTCCATTGACCTGAAGAAAAATGTACTCGTGATCGGCACCACAGG
CTCCCAGACCACCTTTCTTCCTGAGGGAGAGCTACCAGAGTGTGCCCGGTTGGCATATGGGGCTGGAAGAGAGGATGTAC
GGCCAGAGGAGATTGCAGACCAAGAATTAGCAGAAGCCCTTCAAAAATCAGCAGAGGATGCAGAGCGTCAGAAGCCATGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 5 .64 RPM
SRP007412_cerebellum 8 .39 RPM
SRP007412_heart 3 .91 RPM
SRP007412_kidney 6 .36 RPM
SRP007412_liver 9 .18 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000011873 ortholog_one2one 1 retrogene
retro_amel_10,
Bos taurus ENSBTAG00000018718 ortholog_one2one 2 retrogenes
retro_btau_15, retro_btau_650,
Canis familiaris ENSCAFG00000016220 ortholog_one2one 1 retrogene
retro_cfam_193,
Callithrix jacchus ENSCJAG00000008625 ortholog_one2one 1 retrogene
retro_cjac_196,
Cavia porcellus ENSCPOG00000020885 ortholog_one2one 1 retrogene
retro_cpor_88,
Equus caballus ENSECAG00000000762 ortholog_one2one 1 retrogene
retro_ecab_110,
Homo sapiens ENSG00000197312 ortholog_one2one 1 retrogene
retro_hsap_96,
Gorilla gorilla ENSGGOG00000013537 ortholog_one2one 1 retrogene
retro_ggor_143,
Macropus eugenii ENSMEUG00000006148 ortholog_one2one 1 retrogene
retro_meug_1364,
Myotis lucifugus ENSMLUG00000030669 ortholog_one2one 1 retrogene
retro_mluc_68,
Macaca mulatta ENSMMUG00000019912 ortholog_one2one 1 retrogene
retro_mmul_231,
Monodelphis domestica ENSMODG00000003515 ortholog_one2one 1 retrogene
retro_mdom_282,
Mustela putorius furo ENSMPUG00000016332 ortholog_one2one 1 retrogene
retro_mputfur_1509,
Mus musculus ENSMUSG00000078515 ortholog_one2one 1 retrogene
retro_mmus_67,
Oryctolagus cuniculus ENSOCUG00000023891 ortholog_one2one 1 retrogene
retro_ocun_249,
Otolemur garnettii ENSOGAG00000027709 ortholog_one2one 1 retrogene
retro_ogar_4,
Ochotona princeps ENSOPRG00000018448 ortholog_one2one 1 retrogene
retro_opri_4,
Pan troglodytes ENSPTRG00000024059 ortholog_one2one 1 retrogene
retro_ptro_570,
Pteropus vampyrus ENSPVAG00000005084 ortholog_one2one 1 retrogene
retro_pvam_420,
Rattus norvegicus ENSRNOG00000012274 ortholog_one2one 1 retrogene
retro_rnor_2606,
Sus scrofa ENSSSCG00000003462 ortholog_one2one 1 retrogene
retro_sscr_6,
Ictidomys tridecemlineatus ENSSTOG00000019447 ortholog_one2one 1 retrogene
retro_itri_93,
Tarsius syrichta ENSTSYG00000002522 ortholog_one2one 1 retrogene
retro_tsyr_1120,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_158 72.45 73.43
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSPPYG00000001841 retrocopies