RetrogeneDB ID: | retro_meug_187 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | GeneScaffold_5359:72249..72873(+) | ||
Located in intron of: | ENSMEUG00000012752 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSMEUG00000004095 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 65.58 % |
Parental protein coverage: | 90.64 % |
Number of stop codons detected: | 5 |
Number of frameshifts detected | 2 |
Parental | SSSEEVSWISWFCGLRGNEFFCEVDEDYIQDKFNLTGLNEQVPHYRQALDMILDLEPDEELEDNPNQSDL |
S....V.WI.W.C....NEFF..VDE.YIQ.KFNL..LN...PHYRQ..DMILDLEP.E.LE.N.NQS.L | |
Retrocopy | SQFTDVPWILWLCSIHSNEFFYVVDEAYIQNKFNLIRLN**EPHYRQLPDMILDLEPVEGLENNSNQSNL |
Parental | I-EQAAEMLYGLIHARYILTNRGIAQMLEKYQQGDFGYCPRVYCENQPMLPIGLSDI-PGEAMVKLYCPK |
I.EQ....LY.LIHA.Y.LT..G..QMLEKYQQGD...CP.VYCEN.PM.PIGLS.I...EAMVKLY.PK | |
Retrocopy | I>EQTGKILYRLIHAHYMLTK*GTIQMLEKYQQGD---CPCVYCENHPMFPIGLSKI<TSEAMVKLYYPK |
Parental | CMDVYTPKSSRHHHTDGAYFGTGFPHMLFMVHPEYRPKRPANQFVPRLYGFKIHPMAYQLQLQAASNFKS |
CMDVYTPK.S.H.HT..AYFGT.F.HMLF.V.PEY..K..A.Q..P.LY.FKI.PMAYQL..QA..NFKS | |
Retrocopy | CMDVYTPKLSWHWHTGSAYFGTDFLHMLFKVQPEY--K*HAKQHLPKLYAFKIYPMAYQL*IQAVGNFKS |
Parental | PVKTI |
P.KTI | |
Retrocopy | PIKTI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |