RetrogeneDB ID: | retro_meug_561 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold137263:1417..2265(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSMEUG00000010921 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 76.14 % |
Parental protein coverage: | 63.53 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 1 |
Parental | MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELFKRFDLPEGPPESLGRGR |
M.EEYDVI.L.T...ECI..GIMSVN.KKVLHMDRN.YYGGES.SITPLE.L.KRF..P..PP...GRGR | |
Retrocopy | MNEEYDVIILVTCFMECIVLGIMSVNEKKVLHMDRNSYYGGESASITPLEDLYKRFNIPGSPPALMGRGR |
Parental | DWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVPSTETEALASNLMGMFEKRRF |
..NVDLIPKFLMAN.QLVK.LLYTEVT.YLDFKV.EGSF..KGGK.YKV.STE.EAL...LMG.FEK.RF | |
Retrocopy | N*NVDLIPKFLMANDQLVKILLYTEVTQYLDFKVIEGSFFHKGGKVYKVLSTEAEALTCSLMGLFEKHRF |
Parental | RKFLVFVANFDENDPKSFEGVDPQTTTMRDVYKKFDLGQDVIDFTGHALALYRTDDYLDQPCLETINRIK |
R.FLV.VANFDE.D...FEGV.P..TTM.DV.KKFDLGQD.IDFTGHALALYRTDDYLDQPC.ETINRIK | |
Retrocopy | RRFLVYVANFDEKDSRTFEGVNPRKTTM*DV*KKFDLGQDIIDFTGHALALYRTDDYLDQPCYETINRIK |
Parental | LYSESLARYGKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDD-IIMENGKVVGVKSEGEVARCKQ |
LYS.SLARYGKSPYLY.LYGLGELPQG..RLSAIY.GTYMLNK.....II...G.V.G.KSEGE.A.CKQ | |
Retrocopy | LYSNSLARYGKSPYLYRLYGLGELPQGLTRLSAIY-GTYMLNKSIEE<IIVKDGLVIGEKSEGEIAACKQ |
Parental | LICDP |
LIC.P | |
Retrocopy | LICEP |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Macropus eugenii | ENSMEUG00000010921 | 4 retrocopies | |
Microcebus murinus | ENSMICG00000016418 | 1 retrocopy | |
Sarcophilus harrisii | ENSSHAG00000005650 | 1 retrocopy | |
Tupaia belangeri | ENSTBEG00000012540 | 4 retrocopies | |
Tursiops truncatus | ENSTTRG00000011454 | 1 retrocopy |