RetrogeneDB ID: | retro_mluc_941 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429784:13465510..13466023(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | TIPRL | ||
Ensembl ID: | ENSMLUG00000011927 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 78.86 % |
Parental protein coverage: | 62.28 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 0 |
Parental | EGEHSKEVIKPYDWTFTTDYKGTLLGESLKLKVVPTTDHIDTEKLKAREQIKFFEEVLLFEDELHDHGVS |
EGEHS.EVIKP.D.T...DYKGTL.GESLKLK......HIDT..LKAREQIKFF..V.LFEDELHDHGVS | |
Retrocopy | EGEHSREVIKPSD*TYAIDYKGTLHGESLKLKI----NHIDTVQLKAREQIKFFAQVPLFEDELHDHGVS |
Parental | SLSVKIRVMPSSFFLLLRFFLRIDGVLIRMNDTRLYHEADKTYMLREYTSRESRIANLMHVPPSLFTEPN |
SLS.KIRVMPSSFFLLL.FFL.IDG.LI.MND.RLYHEADKTYML.EYTSRES.IANL.HV.PSLFTEPN | |
Retrocopy | SLSMKIRVMPSSFFLLLQFFL*IDGGLIGMNDRRLYHEADKTYML*EYTSRESKIANLIHVSPSLFTEPN |
Parental | EMSQYLPIKETVREKLLFPEKIDQNPTDSQANAPV |
E.SQYL.IKE.V.EKL.FPE.ID.NPTDSQ.NA.V | |
Retrocopy | EISQYLQIKEAVCEKLVFPERIDHNPTDSQENASV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Choloepus hoffmanni | ENSCHOG00000008689 | 3 retrocopies | |
Cavia porcellus | ENSCPOG00000009945 | 1 retrocopy | |
Echinops telfairi | ENSETEG00000005808 | 1 retrocopy | |
Microcebus murinus | ENSMICG00000007808 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000011927 | 3 retrocopies |
retro_mluc_607, retro_mluc_909, retro_mluc_941 ,
|
Monodelphis domestica | ENSMODG00000002880 | 1 retrocopy | |
Mus musculus | ENSMUSG00000040843 | 1 retrocopy | |
Ochotona princeps | ENSOPRG00000011313 | 1 retrocopy | |
Pteropus vampyrus | ENSPVAG00000005071 | 1 retrocopy | |
Rattus norvegicus | ENSRNOG00000003048 | 1 retrocopy | |
Sarcophilus harrisii | ENSSHAG00000018932 | 1 retrocopy | |
Ictidomys tridecemlineatus | ENSSTOG00000014921 | 1 retrocopy | |
Tupaia belangeri | ENSTBEG00000017081 | 3 retrocopies |