RetrogeneDB ID: | retro_nleu_2500 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397362.1:2943644..2944123(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | TMEM126A | ||
Ensembl ID: | ENSNLEG00000016408 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 62.8 % |
Parental protein coverage: | 82.14 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 1 |
Parental | MENHKSNNT-KENITIVDI-SRKINQLPEAERNLLENGSVYVGLNAALCGLIANSLFRRILNVTKARIAA |
MEN.....T.KENITI..I..RKINQLPEAE..LL..GS.YV.LNA.L.GLIANSLF..ILN.T.A.IAA | |
Retrocopy | MENQEPDTTFKENITILGIITRKINQLPEAEKKLLQHGSIYVELNAVLHGLIANSLFLCILNMTQAHIAA |
Parental | GLPMAGIPFLTTDLTYRCFVSFPLNTG-DLDCETCTITRSGLIGLVIGGLYPVFLAIPVNGGLAARYQSA |
..PMA.I.FL.....YR.FV..PLN.G..L..ETCTI...GL.GLV.GGL...F..IP.NGGL.ARY.S. | |
Retrocopy | NSPMAEILFLIVHVFYRSFVNLPLN*G<SLEFETCTIK*GGLVGLVFGGL---FFTIPMNGGLEARYEST |
Parental | LLPHKGNILSYWIRTSKPVLRKML |
LL..KGNILSY..R.SKP..RKML | |
Retrocopy | LLSEKGNILSY*TRISKPDFRKML |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |