RetrogeneDB ID: | retro_ogar_1841 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873569.1:10375754..10376681(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ZRANB2 | ||
Ensembl ID: | ENSOGAG00000000485 | ||
Aliases: | None | ||
Description: | zinc finger, RAN-binding domain containing 2 [Source:HGNC Symbol;Acc:13058] |
Percent Identity: | 91.59 % |
Parental protein coverage: | 93.64 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 0 |
Parental | MSTKNFRVSDGDWICPDKKCGNVNFARRTSCNRCGREKTTEAKMMKAGGTEIGKTLAEKSRGLFSANDWQ |
MSTKNF.VSD.DWICPDKKCGNVNFARRTS.NRCG.EKTTEAKMMKAGGTEIGKTLAEKSRGLFSAND.Q | |
Retrocopy | MSTKNF*VSDQDWICPDKKCGNVNFARRTSRNRCGWEKTTEAKMMKAGGTEIGKTLAEKSRGLFSANDQQ |
Parental | CKTCSNVNWARRSECNMCNTPKYAKLEERTGYGGGFNERENVEYIEREESDGEYDEFGRKKKKYRGKAVG |
CKTCSNVNWARRSECNMCNTPKYAKLEERT.YGGGFNE.ENV.YIEREESDGEYDEFGRKK.KYRGKAVG | |
Retrocopy | CKTCSNVNWARRSECNMCNTPKYAKLEERTVYGGGFNEKENVDYIEREESDGEYDEFGRKK*KYRGKAVG |
Parental | PASILKEVEDKESEGEDEDEDEDLSKYKLDEDEDEDDADLSKYNLDASEEEDSHKKKSNRRSRSKSRSSH |
PASILKEVEDKESEGED.DED.DLSKYKLDEDEDEDDADLSKYNLDASEEEDSH.KKSNRRSRSKSRSSH | |
Retrocopy | PASILKEVEDKESEGEDKDEDKDLSKYKLDEDEDEDDADLSKYNLDASEEEDSHEKKSNRRSRSKSRSSH |
Parental | SRSSSRSSSPSSSRSRSRSRSRSSSSSQSRSRSSSRERSRSRGSKSRSSSRSHRGSSSPRKRSYSSSSSS |
SRSS.RS.SPSSSRSRSRS.SRSSSSSQSRSRSSS...SRS.GSKSRSSS.SHRGSSSPRKRSYSSSSSS | |
Retrocopy | SRSS*RSCSPSSSRSRSRSLSRSSSSSQSRSRSSSTQCSRSCGSKSRSSSGSHRGSSSPRKRSYSSSSSS |
Parental | PERNRKRSRSRSSSSGDRKKRRTRSRSPE |
PERNRKRS.SRSSSSGD.K...TRS.SPE | |
Retrocopy | PERNRKRSHSRSSSSGDCKNKQTRSQSPE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Callithrix jacchus | ENSCJAG00000006356 | 2 retrocopies | |
Monodelphis domestica | ENSMODG00000000504 | 2 retrocopies | |
Oryctolagus cuniculus | ENSOCUG00000004640 | 2 retrocopies | |
Otolemur garnettii | ENSOGAG00000000485 | 4 retrocopies | |
Pan troglodytes | ENSPTRG00000000856 | 1 retrocopy |