RetrogeneDB ID: | retro_pvam_223 | ||
Retrocopylocation | Organism: | Megabat (Pteropus vampyrus) | |
Coordinates: | GeneScaffold_1989:564783..565088(+) | ||
Located in intron of: | ENSPVAG00000013641 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL21 | ||
Ensembl ID: | ENSPVAG00000000077 | ||
Aliases: | None | ||
Description: | ribosomal protein L21 [Source:HGNC Symbol;Acc:10313] |
Percent Identity: | 71.84 % |
Parental protein coverage: | 63.75 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | GKTGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKSR-DSFLKRVKENDQKKKEAKEKGTWVQ |
G...R.Y......V..V.NKQVK.KILAKRINV..EHIKHSKS...SFLK..KE.DQ.KKEAKEKGTW.Q | |
Retrocopy | GMSHRCYRGKTGRVYSVLNKQVKSKILAKRINVHVEHIKHSKSQ<GSFLKHMKEGDQGKKEAKEKGTWIQ |
Parental | LKRQPAPPREAHFVRTNGKEPELLEPIPYEFMA |
LK.QPAPPREAHFVR..GKEPELLEP.P.EFMA | |
Retrocopy | LKCQPAPPREAHFVRSSGKEPELLEPVPCEFMA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |