RetrogeneDB ID: | retro_sara_373 | ||
Retrocopylocation | Organism: | Shrew (Sorex araneus) | |
Coordinates: | scaffold_182503:9471..9703(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | TXN | ||
Ensembl ID: | ENSSARG00000007465 | ||
Aliases: | None | ||
Description: | thioredoxin [Source:HGNC Symbol;Acc:12435] |
Percent Identity: | 83.33 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | VAFQEALNGAGDKLVVVDFSAT-WCGPCKMIKPFYHSLSEKYSNVVFLEVDVDDCQDVASECEVKCMPTF |
VAFQEALN.AGD.L.VVDFSA..WCGPCK.IKPFYHSL.EKYSNVV.LEVD.DDCQDVASEC.VKCMP.F | |
Retrocopy | VAFQEALNSAGDRLLVVDFSAM>WCGPCKIIKPFYHSLAEKYSNVVSLEVDIDDCQDVASECKVKCMPNF |
Parental | QFFKKGKK |
.FFKKG.K | |
Retrocopy | *FFKKGQK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |