RetrogeneDB ID: | retro_shar_106 | ||
Retrocopylocation | Organism: | Tasmanian devil (Sarcophilus harrisii) | |
Coordinates: | GL849739.1:564533..565079(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSSHAG00000009605 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ARF1 | ||
Ensembl ID: | ENSSHAG00000014599 | ||
Aliases: | None | ||
Description: | ADP-ribosylation factor 1 [Source:HGNC Symbol;Acc:652] |
Percent Identity: | 78.45 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MGNIFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGG |
MGN.F.N.FKGLFGKKEMR.LMVGLD.AGKTTILYKLKLGEIVTT.PT..FNVE...Y....FTVWDVGG | |
Retrocopy | MGNVFGNRFKGLFGKKEMRLLMVGLDSAGKTTILYKLKLGEIVTTMPTMDFNVEIIPYRDVCFTVWDVGG |
Parental | QDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEIT |
QD.IRPLWRHYFQNTQGLIFVVDS.DRERV.EAREEL.RML.E....DA.LLV.ANKQDLP.AM.A.EIT | |
Retrocopy | QDRIRPLWRHYFQNTQGLIFVVDSGDRERVGEAREELTRMLEEIGSKDAALLVVANKQDLPHAMKADEIT |
Parental | DKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRNQK |
.KLGL.SL..RNWY.QATCATSGDGLYEGL.WLS.QL...K | |
Retrocopy | EKLGLRSLLERNWYVQATCATSGDGLYEGLAWLSKQLQHRK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |