RetrogeneDB ID: | retro_shar_521 | ||
Retrocopylocation | Organism: | Tasmanian devil (Sarcophilus harrisii) | |
Coordinates: | GL849765.1:35521..35791(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | FABP7 | ||
Ensembl ID: | ENSSHAG00000003313 | ||
Aliases: | None | ||
Description: | fatty acid binding protein 7, brain [Source:HGNC Symbol;Acc:3562] |
Percent Identity: | 75.56 % |
Parental protein coverage: | 68.18 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | TDSHNFDEYMKALGVGFATRQVGNVTKPTVIISQEGDKVVIRTQSTFKNTEISFHLGEEFDETTPDDRNC |
TDSHNFDE.MK..GV.FA.RQVGNVTK.TVIISQEG.K.V.RT..TFKNT.ISFHL.E...ETTPD...C | |
Retrocopy | TDSHNFDENMKVPGVSFANRQVGNVTKRTVIISQEGGKAVMRTPRTFKNTGISFHLREKLEETTPDNSHC |
Parental | KSVVSLDGDKLVHVQKWDGK |
K.V.SLDGDKL.HVQKWDGK | |
Retrocopy | KYVESLDGDKLIHVQKWDGK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Cavia porcellus | ENSCPOG00000014056 | 1 retrocopy | |
Homo sapiens | ENSG00000164434 | 1 retrocopy | |
Gorilla gorilla | ENSGGOG00000025475 | 1 retrocopy | |
Macaca mulatta | ENSMMUG00000021907 | 1 retrocopy | |
Oryctolagus cuniculus | ENSOCUG00000001497 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000031110 | 1 retrocopy | |
Ochotona princeps | ENSOPRG00000000992 | 1 retrocopy | |
Pongo abelii | ENSPPYG00000016979 | 1 retrocopy | |
Pan troglodytes | ENSPTRG00000018564 | 1 retrocopy | |
Sarcophilus harrisii | ENSSHAG00000003313 | 1 retrocopy |
retro_shar_521 ,
|
Sarcophilus harrisii | ENSSHAG00000015843 | 1 retrocopy |