RetrogeneDB ID: | retro_tbel_3168 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_132610:4472..4738(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | MPC2 | ||
Ensembl ID: | ENSTBEG00000014189 | ||
Aliases: | None | ||
Description: | mitochondrial pyruvate carrier 2 [Source:HGNC Symbol;Acc:24515] |
Percent Identity: | 66.3 % |
Parental protein coverage: | 98.89 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 3 |
Parental | RTVFF-WAPIMKWG-LVCAGLADMAR-PAEKLSTAQSTVLMATGLIWSRYSLVIIPKNWSLFAVNFFVGA |
RTVFF.W.P..KWG.LV.A.LAD.A..PAE..STA.ST.LMA.G.IW.RYSLVIIPKNWSL.AVN..... | |
Retrocopy | RTVFF>WVPLLKWG<LVWASLADTAD<PAENSSTAPSTALMAIGFIWLRYSLVIIPKNWSLCAVNLGGQT |
Parental | AGASQLFRIWRYNQELKAKANK |
..ASQL.RIW.YN..LK.KAN. | |
Retrocopy | KRASQLSRIWGYNPKLKTKANR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |