RetrogeneDB ID: | retro_tbel_4570 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_90976:4122..4604(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSTBEG00000003474 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 83.33 % |
Parental protein coverage: | 65.31 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | YEKRMATEVAADALGEEWKGYVVRISGGNDKQGFPMKQGVLTHGRVRLLLSKGHSCYRPRRTGE-KRKSV |
YEK..ATEVAADALGEEWKGYVVRISGGNDKQGFPMKQG.LTH.RV.LLLSKGHSCYRPRRTGE.K.KSV | |
Retrocopy | YEKYTATEVAADALGEEWKGYVVRISGGNDKQGFPMKQGILTHCRVCLLLSKGHSCYRPRRTGERKHKSV |
Parental | RGCTVDANLSILNSVIVKK-EKNIPGLTDTTVPRHLGPKRASRIPKLFNLSKEDDVRQYVVRKPLNKEGK |
RGC.VDANL........K..EK.IP.LTDTTVPR.LGPKRASRI.KLFNLSKEDDVRQYVVRKPLNKEGK | |
Retrocopy | RGCVVDANLFSTWLLLKKE<EKDIPRLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPLNKEGK |
Parental | NPRTKAPKIQCLVTPCVLQHKR |
.PRTKA.KIQ.L.TP.VLQHKR | |
Retrocopy | KPRTKATKIQRLLTPRVLQHKR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |