Parental gene:

ENSOPRG00000012290

Aliases:None
Description:None
Organism:Southern American pika (Ochotona princeps)
Coordinates:GeneScaffold_2317:184104..185215(-)


>ENSOPRG00000012290
CTGAATATCTCCTTCCCAGCCACTGGCTGCCAAAAGCTCATCGAAGTGGACGATGAGCGTAAACTTCGAACTTTCTATGA
GAAGCGCATGGCAACTGAAGTAGCTGCGGACGCTCTGGGTGAGGAGTGGAAGGGCTACGTGGTCCGGATCAGTGGTGGAA
ATGACAAACAAGGATTCCCCATGAAGCAAGGTGTCTTGACCCATGGCCGAGTTCGCCTGCTACTGAGCAAGGGGCACTCC
TGTTACAGACCCAGGAGAACTGGGGAAAGAAAACGCAAATCAGTGCGGGGCTGCATTGTCGATGCCAACTTGAGTGTTCT
CAACTTGGTTATAGTAAAAAAAGGAGAGAAAGATATTCCGGGATTGACTGATACTACGGTGCCTCGTCGCCTGGGACCTA
AAAGAGCAAGCAGAATCCGCAAA

Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000017634 possible_ortholog 1 retrogene
Ailuropoda melanoleuca ENSAMEG00000002925 possible_ortholog 14 retrogenes
Canis familiaris ENSCAFG00000001615 possible_ortholog 4 retrogenes
Choloepus hoffmanni ENSCHOG00000004622 possible_ortholog 15 retrogenes
Callithrix jacchus ENSCJAG00000020612 possible_ortholog 6 retrogenes
Cavia porcellus ENSCPOG00000003750 ortholog_one2many 4 retrogenes
Dasypus novemcinctus ENSDNOG00000007241 possible_ortholog 1 retrogene
Dipodomys ordii ENSDORG00000012057 possible_ortholog 2 retrogenes
Equus caballus ENSECAG00000016190 possible_ortholog 5 retrogenes
Echinops telfairi ENSETEG00000001584 possible_ortholog 18 retrogenes
Ficedula albicollis ENSFALG00000003078 ortholog_one2one 1 retrogene
Felis catus ENSFCAG00000002541 possible_ortholog 26 retrogenes
Homo sapiens ENSG00000137154 possible_ortholog 16 retrogenes
Gorilla gorilla ENSGGOG00000002652 possible_ortholog 13 retrogenes
Loxodonta africana ENSLAFG00000010766 ortholog_one2many 4 retrogenes
Microcebus murinus ENSMICG00000007262 possible_ortholog 24 retrogenes
Myotis lucifugus ENSMLUG00000007588 possible_ortholog 27 retrogenes
Macaca mulatta ENSMMUG00000003412 possible_ortholog 1 retrogene
Monodelphis domestica ENSMODG00000004095 possible_ortholog 1 retrogene
Mus musculus ENSMUSG00000028495 possible_ortholog 45 retrogenes
Nomascus leucogenys ENSNLEG00000017532 possible_ortholog 14 retrogenes
Otolemur garnettii ENSOGAG00000016254 possible_ortholog 21 retrogenes
Ochotona princeps ENSOPRG00000000751 within_species_paralog 6 retrogenes
Pongo abelii ENSPPYG00000019193 possible_ortholog 15 retrogenes
Pan troglodytes ENSPTRG00000039153 possible_ortholog 19 retrogenes
Rattus norvegicus ENSRNOG00000007663 possible_ortholog 21 retrogenes
Rattus norvegicus ENSRNOG00000049025 possible_ortholog 8 retrogenes
Sorex araneus ENSSARG00000006549 possible_ortholog 6 retrogenes
Sarcophilus harrisii ENSSHAG00000005486 possible_ortholog 1 retrogene
Sus scrofa ENSSSCG00000005169 possible_ortholog 6 retrogenes
Tupaia belangeri ENSTBEG00000003474 possible_ortholog 33 retrogenes
Tarsius syrichta ENSTSYG00000008569 possible_ortholog 8 retrogenes
Tursiops truncatus ENSTTRG00000001787 possible_ortholog 11 retrogenes
Vicugna pacos ENSVPAG00000006030 possible_ortholog 10 retrogenes

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_opri_78 95.16 87.23
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2. retro_opri_123 82.98 99.29
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3. retro_opri_642 95.16 87.23
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4. retro_opri_862 64.34 100.00
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5. retro_opri_895 82.98 99.29
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Download FASTA sequences of all ENSOPRG00000012290 retrocopies