RetrogeneDB ID: | retro_ttru_883 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | GeneScaffold_483:146223..146653(+) | ||
Located in intron of: | ENSTTRG00000000480 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PIGP | ||
Ensembl ID: | ENSTTRG00000007711 | ||
Aliases: | None | ||
Description: | phosphatidylinositol glycan anchor biosynthesis, class P [Source:HGNC Symbol;Acc:3046] |
Percent Identity: | 70.83 % |
Parental protein coverage: | 92.21 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | RLSKDTGKMVENSPSPLPERAIYGFVLFLSSQFGFILYLVWAFIPESWLNSLGLTYWPQKYWAVALPVYL |
RLSK.TGKMVENSPSPLPERA.YGF.LFLSSQFGF.LYLVWAFIPESWLNSLGLTYWPQK.WAV...... | |
Retrocopy | RLSKATGKMVENSPSPLPERATYGFLLFLSSQFGFTLYLVWAFIPESWLNSLGLTYWPQKHWAVSCTACV |
Parental | -LITAVI-GYVLLFVXXXXXXXXXXXXXXXXXNYAKNQQPKKYQEEAIPALRDIPISEVNQMFFLKAKEL |
.L...V..GYVL.F..................N.AKNQQ.KKY.E.A.PALRDIPISEVNQMFFL.AKEL | |
Retrocopy | >LLITVVTGYVLSFGINMTSTSPLNSIHTITDNCAKNQQQKKYREGAMPALRDIPISEVNQMFFLAAKEL |
Parental | YTKN |
YTKN | |
Retrocopy | YTKN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |